RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 SRXN1Q9BYN0 137 aa11.56□□□□□ -0.56
COL5A1-206ENST00000465877 PRRG4Q9BZD6 226 aa11.56□□□□□ -0.56
COL5A1-206ENST00000465877 PIGMQ9H3S5 423 aa11.56□□□□□ -0.56
COL5A1-206ENST00000465877 RLIMQ9NVW2 624 aa11.56□□□□□ -0.56
COL5A1-206ENST00000465877 FOXD3Q9UJU5 478 aaPredicted RBP11.56□□□□□ -0.56
COL5A1-206ENST00000465877 SPIN1Q9Y657 262 aaPredicted RBP11.56□□□□□ -0.56
COL5A1-206ENST00000465877 CAPN7Q9Y6W3 813 aa11.56□□□□□ -0.56
COL5A1-206ENST00000465877 A0A1W2PNR3 127 aa11.55□□□□□ -0.56
COL5A1-206ENST00000465877 CFAP73A6NFT4 308 aa11.55□□□□□ -0.56
COL5A1-206ENST00000465877 BBIP1A8MTZ0 92 aa11.55□□□□□ -0.56
COL5A1-206ENST00000465877 FAAHO00519 579 aa11.55□□□□□ -0.56
COL5A1-206ENST00000465877 FBP2O00757 339 aa11.55□□□□□ -0.56
COL5A1-206ENST00000465877 SS18L1O75177 396 aaPredicted RBP11.55□□□□□ -0.56
COL5A1-206ENST00000465877 PGM3O95394 542 aa11.55□□□□□ -0.56
COL5A1-206ENST00000465877 GKN3PP0CG01 181 aa11.55□□□□□ -0.56
COL5A1-206ENST00000465877 ETS2P15036 469 aa11.55□□□□□ -0.56
COL5A1-206ENST00000465877 IDH2P48735 452 aaKnown RBP11.55□□□□□ -0.56
COL5A1-206ENST00000465877 CDK6Q00534 326 aa11.55□□□□□ -0.56
COL5A1-206ENST00000465877 CAPRIN1Q14444 709 aaKnown RBP11.55□□□□□ -0.56
COL5A1-206ENST00000465877 CYP51A1Q16850 503 aa11.55□□□□□ -0.56
COL5A1-206ENST00000465877 TMEM176BQ3YBM2 270 aaPredicted RBP11.55□□□□□ -0.56
COL5A1-206ENST00000465877 SYT14P1Q58G82 188 aa11.55□□□□□ -0.56
COL5A1-206ENST00000465877 COQ5Q5HYK3 327 aa11.55□□□□□ -0.56
COL5A1-206ENST00000465877 ZNF311Q5JNZ3 666 aa11.55□□□□□ -0.56
COL5A1-206ENST00000465877 SNX32Q86XE0 403 aa11.55□□□□□ -0.56
COL5A1-206ENST00000465877 ZNF440Q8IYI8 595 aa11.55□□□□□ -0.56
COL5A1-206ENST00000465877 RNF128Q8TEB7 428 aa11.55□□□□□ -0.56
COL5A1-206ENST00000465877 SLC39A3Q9BRY0 314 aa11.55□□□□□ -0.56
COL5A1-206ENST00000465877 SPATA9Q9BWV2 254 aa11.55□□□□□ -0.56
COL5A1-206ENST00000465877 CTPS2Q9NRF8 586 aa11.55□□□□□ -0.56
COL5A1-206ENST00000465877 GALNT8Q9NY28 637 aa11.55□□□□□ -0.56
COL5A1-206ENST00000465877 CHRNA9Q9UGM1 479 aa11.55□□□□□ -0.56
COL5A1-206ENST00000465877 IFT52Q9Y366 437 aa11.55□□□□□ -0.56
COL5A1-206ENST00000465877 CHST2Q9Y4C5 530 aa11.55□□□□□ -0.56
COL5A1-206ENST00000465877 AKAP9Q99996 3911 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 FXYD1O00168 92 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 DYNC1I1O14576 645 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 MRASO14807 208 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 SLC22A2O15244 555 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 SMNDC1O75940 238 aaKnown RBP eCLIP11.54□□□□□ -0.56
COL5A1-206ENST00000465877 PLGP00747 810 aaPredicted RBP11.54□□□□□ -0.56
COL5A1-206ENST00000465877 AGTR1P30556 359 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 APOBEC1P41238 236 aaKnown RBP11.54□□□□□ -0.56
COL5A1-206ENST00000465877 KIR2DL2P43627 348 aaPredicted RBP11.54□□□□□ -0.56
COL5A1-206ENST00000465877 HTR3AP46098 478 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 CARD18P57730 90 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 SORDQ00796 357 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 MYBPHQ13203 477 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 ADRM1Q16186 407 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 ZSWIM7Q19AV6 140 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 MMEL1Q495T6 779 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 EEF1A1P5Q5VTE0 462 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 REEP3Q6NUK4 255 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 FAM214BQ7L5A3 538 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 SPATA21Q7Z572 469 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 SERPINA11Q86U17 422 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 LSRQ86X29 649 aaPredicted RBP11.54□□□□□ -0.56
COL5A1-206ENST00000465877 KRT73Q86Y46 540 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 PTOV1Q86YD1 416 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 HIPK4Q8NE63 616 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 ABHD3Q8WU67 409 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 OSTF1Q92882 214 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 STARD4Q96DR4 205 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 C14orf79Q96F83 325 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 GMPPAQ96IJ6 420 aaPredicted RBP11.54□□□□□ -0.56
COL5A1-206ENST00000465877 OR5B2Q96R09 309 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 RBM24Q9BX46 236 aaKnown RBP11.54□□□□□ -0.56
COL5A1-206ENST00000465877 NSRP1Q9H0G5 558 aaKnown RBP11.54□□□□□ -0.56
COL5A1-206ENST00000465877 TIGARQ9NQ88 270 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 SERINC1Q9NRX5 453 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 ARMCX1Q9P291 453 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 KCNN3Q9UGI6 736 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 CLEC4AQ9UMR7 237 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 ANGPT4Q9Y264 503 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 EMC9Q9Y3B6 208 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 NOTCH2Q04721 2471 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 PDZD2O15018 2839 aa11.54□□□□□ -0.56
COL5A1-206ENST00000465877 TMED7-TICAM2A0A0A6YYA0 188 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 IGHV3-15A0A0B4J1V0 119 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 SYT5O00445 386 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 MSTNO14793 375 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 FRS3O43559 492 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 CD8BP10966 210 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 PRG2P13727 222 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 SLC6A2P23975 617 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 AQP1P29972 269 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 ADSLP30566 484 aaPredicted RBP11.53□□□□□ -0.56
COL5A1-206ENST00000465877 SSTR2P30874 369 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 PRKAR1BP31321 381 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 PEX19P40855 299 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 SLC1A3P43003 542 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 DIO1P49895 249 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 POLR2HP52434 150 aaKnown RBP11.53□□□□□ -0.56
COL5A1-206ENST00000465877 SEC24CP53992 1094 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 SNTB1Q13884 538 aaKnown RBP11.53□□□□□ -0.56
COL5A1-206ENST00000465877 FCRLAQ7L513 359 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 ZNF550Q7Z398 422 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 NET1Q7Z628 596 aaPredicted RBP11.53□□□□□ -0.56
COL5A1-206ENST00000465877 BTLAQ7Z6A9 289 aa11.53□□□□□ -0.56
COL5A1-206ENST00000465877 ZNF295-AS1Q8N0V1 137 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms