RNA–Protein interactions for RNA: ENST00000463419.1

NIN-208, Transcript of ninein, human

TSL 4

Gene NIN, Length 1,317 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIN-208	ENST00000463419	ZNF619	Q8N2I2	560 aa		11.55	□□□□□ -0.56
NIN-208	ENST00000463419	FAM71C	Q8NEG0	241 aa		11.55	□□□□□ -0.56
NIN-208	ENST00000463419	OIT3	Q8WWZ8	545 aa		11.55	□□□□□ -0.56
NIN-208	ENST00000463419	ST8SIA1	Q92185	356 aa		11.55	□□□□□ -0.56
NIN-208	ENST00000463419	MAEL	Q96JY0	434 aa	Known RBP	11.55	□□□□□ -0.56
NIN-208	ENST00000463419	OR52E6	Q96RD3	313 aa		11.55	□□□□□ -0.56
NIN-208	ENST00000463419	MANSC1	Q9H8J5	431 aa		11.55	□□□□□ -0.56
NIN-208	ENST00000463419	ACER3	Q9NUN7	267 aa		11.55	□□□□□ -0.56
NIN-208	ENST00000463419	NKIRAS1	Q9NYS0	192 aa		11.55	□□□□□ -0.56
NIN-208	ENST00000463419	KLHL13	Q9P2N7	655 aa		11.55	□□□□□ -0.56
NIN-208	ENST00000463419	SPG11	Q96JI7	2443 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	ITPR3	Q14573	2671 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	CLDN24	A6NM45	220 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	KLF4	O43474	513 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	YES1	P07947	543 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	PPP3CB	P16298	524 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	HOXC12	P31275	282 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	MERTK	Q12866	999 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	COX20	Q5RI15	118 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	NXN	Q6DKJ4	435 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	TFAP2E	Q6VUC0	442 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	ZNF621	Q6ZSS3	439 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	PLEKHM3	Q6ZWE6	761 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	MAVS	Q7Z434	540 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	CXorf67	Q86X51	503 aa	Predicted RBP	11.54	□□□□□ -0.56
NIN-208	ENST00000463419	SLC43A2	Q8N370	569 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	TRIML2	Q8N7C3	387 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	ANKFN1	Q8N957	763 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	WFDC11	Q8NEX6	87 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	PNPT1	Q8TCS8	783 aa	Known RBP	11.54	□□□□□ -0.56
NIN-208	ENST00000463419	TMEM234	Q8WY98	164 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	OR5B2	Q96R09	309 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	ZBTB18	Q99592	522 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	PSD2	Q9BQI7	771 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	ACTR6	Q9GZN1	396 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	UBTD1	Q9HAC8	227 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	GP6	Q9HCN6	339 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	FANCF	Q9NPI8	374 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	SERINC1	Q9NRX5	453 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	BEX4	Q9NWD9	120 aa	Predicted RBP	11.54	□□□□□ -0.56
NIN-208	ENST00000463419	ING1	Q9UK53	422 aa	Predicted RBP	11.54	□□□□□ -0.56
NIN-208	ENST00000463419	SLC35A3	Q9Y2D2	325 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	GPR52	Q9Y2T5	361 aa		11.54	□□□□□ -0.56
NIN-208	ENST00000463419	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	11.53	□□□□□ -0.56
NIN-208	ENST00000463419	SMAD9	O15198	467 aa	Known RBP	11.53	□□□□□ -0.56
NIN-208	ENST00000463419	ADAM11	O75078	769 aa		11.53	□□□□□ -0.56
NIN-208	ENST00000463419	GCM2	O75603	506 aa	Predicted RBP	11.53	□□□□□ -0.56
NIN-208	ENST00000463419	SLC22A3	O75751	556 aa		11.53	□□□□□ -0.56
NIN-208	ENST00000463419	F12	P00748	615 aa	Predicted RBP	11.53	□□□□□ -0.56
NIN-208	ENST00000463419	CHRM4	P08173	479 aa		11.53	□□□□□ -0.56
NIN-208	ENST00000463419	IDO1	P14902	403 aa		11.53	□□□□□ -0.56
NIN-208	ENST00000463419	PSMB1	P20618	241 aa	Known RBP	11.53	□□□□□ -0.56
NIN-208	ENST00000463419	RYK	P34925	604 aa		11.53	□□□□□ -0.56
NIN-208	ENST00000463419	KCNJ10	P78508	379 aa		11.53	□□□□□ -0.56
NIN-208	ENST00000463419	HPCA	P84074	193 aa		11.53	□□□□□ -0.56
NIN-208	ENST00000463419	LRRC74A	Q0VAA2	488 aa		11.53	□□□□□ -0.56
NIN-208	ENST00000463419	ACKR1	Q16570	336 aa		11.53	□□□□□ -0.56
NIN-208	ENST00000463419	PDCD4	Q53EL6	469 aa	Known RBP	11.53	□□□□□ -0.56
NIN-208	ENST00000463419	KRTAP1-3	Q8IUG1	177 aa		11.53	□□□□□ -0.56
NIN-208	ENST00000463419	GABRG1	Q8N1C3	465 aa		11.53	□□□□□ -0.56
NIN-208	ENST00000463419	GLB1L3	Q8NCI6	653 aa	Predicted RBP	11.53	□□□□□ -0.56
NIN-208	ENST00000463419	ZNF563	Q8TA94	476 aa		11.53	□□□□□ -0.56
NIN-208	ENST00000463419	PIWIL2	Q8TC59	973 aa	Known RBP	11.53	□□□□□ -0.56
NIN-208	ENST00000463419	ARL8A	Q96BM9	186 aa		11.53	□□□□□ -0.56
NIN-208	ENST00000463419	TRNT1	Q96Q11	434 aa	Known RBP	11.53	□□□□□ -0.56
NIN-208	ENST00000463419	OR52B2	Q96RD2	323 aa		11.53	□□□□□ -0.56
NIN-208	ENST00000463419	CCDC106	Q9BWC9	280 aa		11.53	□□□□□ -0.56
NIN-208	ENST00000463419	OR10A4	Q9H209	315 aa		11.53	□□□□□ -0.56
NIN-208	ENST00000463419	SLC38A1	Q9H2H9	487 aa		11.53	□□□□□ -0.56
NIN-208	ENST00000463419	BCO1	Q9HAY6	547 aa		11.53	□□□□□ -0.56
NIN-208	ENST00000463419	DLL4	Q9NR61	685 aa		11.53	□□□□□ -0.56
NIN-208	ENST00000463419	CTPS2	Q9NRF8	586 aa		11.53	□□□□□ -0.56
NIN-208	ENST00000463419	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	11.53	□□□□□ -0.56
NIN-208	ENST00000463419	SLC6A13	Q9NSD5	602 aa		11.53	□□□□□ -0.56
NIN-208	ENST00000463419	VPS13C	Q709C8	3753 aa		11.52	□□□□□ -0.57
NIN-208	ENST00000463419	RFXANK	O14593	260 aa		11.52	□□□□□ -0.57
NIN-208	ENST00000463419	KLF11	O14901	512 aa		11.52	□□□□□ -0.57
NIN-208	ENST00000463419	CYTIP	O60759	359 aa		11.52	□□□□□ -0.57
NIN-208	ENST00000463419	DIAPH2	O60879	1101 aa		11.52	□□□□□ -0.57
NIN-208	ENST00000463419	IL6	P05231	212 aa		11.52	□□□□□ -0.57
NIN-208	ENST00000463419	BMP2	P12643	396 aa		11.52	□□□□□ -0.57
NIN-208	ENST00000463419	APOBEC1	P41238	236 aa	Known RBP	11.52	□□□□□ -0.57
NIN-208	ENST00000463419	DIO1	P49895	249 aa		11.52	□□□□□ -0.57
NIN-208	ENST00000463419	NKX6-1	P78426	367 aa	Predicted RBP	11.52	□□□□□ -0.57
NIN-208	ENST00000463419	TXNL4A	P83876	142 aa	Known RBP	11.52	□□□□□ -0.57
NIN-208	ENST00000463419	RASGEF1B	Q0VAM2	473 aa		11.52	□□□□□ -0.57
NIN-208	ENST00000463419	TSC22D1	Q15714	1073 aa		11.52	□□□□□ -0.57
NIN-208	ENST00000463419	SYT14P1	Q58G82	188 aa		11.52	□□□□□ -0.57
NIN-208	ENST00000463419	BEX5	Q5H9J7	111 aa		11.52	□□□□□ -0.57
NIN-208	ENST00000463419	LRRC74B	Q6ZQY2	392 aa		11.52	□□□□□ -0.57
NIN-208	ENST00000463419	TMPPE	Q6ZT21	453 aa		11.52	□□□□□ -0.57
NIN-208	ENST00000463419	WFDC8	Q8IUA0	241 aa		11.52	□□□□□ -0.57
NIN-208	ENST00000463419	ARFGAP2	Q8N6H7	521 aa		11.52	□□□□□ -0.57
NIN-208	ENST00000463419	CNOT9	Q92600	299 aa	Known RBP	11.52	□□□□□ -0.57
NIN-208	ENST00000463419	ZNF75CP	Q92670	426 aa	Predicted RBP	11.52	□□□□□ -0.57
NIN-208	ENST00000463419	S100PBP	Q96BU1	408 aa		11.52	□□□□□ -0.57
NIN-208	ENST00000463419	ZNF300	Q96RE9	604 aa	Predicted RBP	11.52	□□□□□ -0.57
NIN-208	ENST00000463419	PIP5K1A	Q99755	562 aa		11.52	□□□□□ -0.57
NIN-208	ENST00000463419	TACO1	Q9BSH4	297 aa	Known RBP	11.52	□□□□□ -0.57
NIN-208	ENST00000463419	EXOSC3	Q9NQT5	275 aa	Known RBP	11.52	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms