RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 PRPH2P23942 346 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 PSMA4P25789 261 aaKnown RBP4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 PCSK6P29122 969 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 ALDH3A1P30838 453 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 ARRB2P32121 409 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 SFTPDP35247 375 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 GSTM5P46439 218 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 MTNR1BP49286 362 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 PSMD4P55036 377 aaKnown RBP4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 CASP9P55211 416 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 CTBP2P56545 445 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 CARD18P57730 90 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 EEF1A1P68104 462 aaKnown RBP4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 GANABQ14697 944 aaKnown RBP4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 LASP1Q14847 261 aaKnown RBP4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 PCLAFQ15004 111 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 GUSBP1Q15486 140 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 TOMM34Q15785 309 aaPredicted RBP4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 NDUFAF6Q330K2 333 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 UGT3A2Q3SY77 523 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 TMEM176BQ3YBM2 270 aaPredicted RBP4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 CCDC153Q494R4 210 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 GLYR1Q49A26 553 aaPredicted RBP4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 ARL13AQ5H913 290 aaPredicted RBP4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 CPTPQ5TA50 214 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 EEF1A1P5Q5VTE0 462 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 LIPMQ5VYY2 423 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 KANK2Q63ZY3 851 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 CBLN3Q6UW01 205 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 STAC2Q6ZMT1 411 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 ZCCHC23Q6ZST2 131 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 OLIG3Q7RTU3 272 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 NUFIP2Q7Z417 695 aaKnown RBP4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 BIVMQ86UB2 503 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 LCA5Q86VQ0 697 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 LYSMD2Q8IV50 215 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 DDIASQ8IXT1 998 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 CLEC4FQ8N1N0 589 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 KRTCAP2Q8N6L1 136 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 MAPK1IP1LQ8NDC0 245 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 CEP70Q8NHQ1 597 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 RFWD2Q8NHY2 731 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 PPP1R14CQ8TAE6 165 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 FAM76AQ8TAV0 307 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 RAB3IL1Q8TBN0 382 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 FAM110BQ8TC76 370 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 TSPEARQ8WU66 669 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 ABHD3Q8WU67 409 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 HOXB13Q92826 284 aaPredicted RBP4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 NEUROG1Q92886 237 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 CDS1Q92903 461 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 PIGTQ969N2 578 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 FAM120BQ96EK7 910 aaKnown RBP4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 DTNBP1Q96EV8 351 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 ZBED6CLQ96FA7 236 aaPredicted RBP4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 C3orf30Q96M34 536 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 MECRQ9BV79 373 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 SRXN1Q9BYN0 137 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 ANKZF1Q9H8Y5 726 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 C3orf14Q9HBI5 128 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 UBQLN4Q9NRR5 601 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 SIRT3Q9NTG7 399 aaPredicted RBP4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 MED17Q9NVC6 651 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 SLC17A7Q9P2U7 560 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 ABCG2Q9UNQ0 655 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 WBP11Q9Y2W2 641 aaKnown RBP4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 ZNF175Q9Y473 711 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 SPEF1Q9Y4P9 236 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 SNX8Q9Y5X2 465 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 FLNAP21333 2647 aaKnown RBP4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 TLN2Q9Y4G6 2542 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 PLCE1Q9P212 2302 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 IGLV3-32A0A0A0MS00 114 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 ZNF195O14628 629 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 PIP5K1BO14986 540 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 LSM1O15116 133 aaKnown RBP4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 ADAMDEC1O15204 470 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 GOSR1O95249 250 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 SYNGR4O95473 234 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 CNOT4O95628 575 aaKnown RBP4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 NUDT14O95848 222 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 C6orf47O95873 294 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 ADAP00813 363 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 FGF4P08620 206 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 LINGO3P0C6S8 592 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 BCKDHAP12694 445 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 PTNP21246 168 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 FPR1P21462 350 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 EDNRAP25101 427 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 FRKP42685 505 aaPredicted RBP4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 PTH2RP49190 550 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 CCT3P49368 545 aaKnown RBP4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 PRIM2P49643 509 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 ZNF41P51814 821 aaPredicted RBP4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 PSPHP78330 225 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 POU6F2P78424 691 aaPredicted RBP4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 ZNF117Q03924 483 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 TP53BP2Q13625 1128 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 PDE7AQ13946 482 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 PTGR1Q14914 329 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms