RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 AP4B1Q9Y6B7 739 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 COMMD10Q9Y6G5 202 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 IGHV3OR16-10A0A075B7F0 116 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 IQANK1A0A1B0GTG1 560 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 C2orf92A0A1B0GVN3 265 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 PPIHO43447 177 aaKnown RBP4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 UGT2B11O75310 529 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 SERPINA6P08185 405 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 ADRA2AP08913 450 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 PPIAL4GP0DN37 164 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 CDH1P12830 882 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 ZNF12P17014 697 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 MSNP26038 577 aaKnown RBP4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 EPHA3P29320 983 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 ATP5DP30049 168 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 TIA1P31483 386 aaKnown RBP eCLIP4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 ALDH9A1P49189 494 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 TMED10P49755 219 aaKnown RBP4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 SEC24CP53992 1094 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 RPS13P62277 151 aaKnown RBP4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 IRX6P78412 446 aaPredicted RBP4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 LCN2P80188 198 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 MRPS35P82673 323 aaKnown RBP4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 RGS1Q08116 209 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 CUL4AQ13619 759 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 KCNJ11Q14654 390 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 ARL13AQ5H913 290 aaPredicted RBP4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 ZNF311Q5JNZ3 666 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 SLC9A4Q6AI14 798 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 ZNF534Q76KX8 674 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 SLC29A4Q7RTT9 530 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 ZNF567Q8N184 647 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 LYG1Q8N1E2 194 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 RPP25LQ8N5L8 163 aaKnown RBP4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 ZNF615Q8N8J6 731 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 NIPA2Q8N8Q9 360 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 C17orf47Q8NEP4 570 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 RNF128Q8TEB7 428 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 ABHD3Q8WU67 409 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 SKA2Q8WVK7 121 aaPredicted RBP4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 RDH5Q92781 318 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 ZG16BQ96DA0 208 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 PBKQ96KB5 322 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 FOPNLQ96NB1 174 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 RNF157Q96PX1 679 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 SYT11Q9BT88 431 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 PRRG4Q9BZD6 226 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 P2RY12Q9H244 342 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 GANQ9H2C0 597 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 CXorf36Q9H7Y0 433 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 TRIM36Q9NQ86 728 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 HEYLQ9NQ87 328 aaPredicted RBP4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 KLHL13Q9P2N7 655 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 SEC14L4Q9UDX3 406 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 PURGQ9UJV8 347 aaKnown RBP4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 ANAPC7Q9UJX3 599 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 DAPP1Q9UN19 280 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 FOXJ3Q9UPW0 622 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 HEY1Q9Y5J3 304 aa4.37□□□□□ -1.71
SBDSP1-204ENST00000453858 FLG2Q5D862 2391 aaPredicted RBP4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 UQCRHLA0A096LP55 91 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 A0A1B0GVY2 172 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 EFCAB8A8MWE9 144 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 hCG_2039718K7EN88 272 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 M0R3H8 397 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 RAB27BO00194 218 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 RGS10O43665 173 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 RRP9O43818 475 aaKnown RBP4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 FGF17O60258 216 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 EEDO75530 441 aaKnown RBP4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 ZNF432O94892 652 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 SERPIND1P05546 499 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 YES1P07947 543 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 ERCC1P07992 297 aaPredicted RBP4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 TNNT1P13805 278 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 CNTFP26441 200 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 CHATP28329 748 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 CD80P33681 288 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 PTDSS1P48651 473 aaKnown RBP4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 HERVK_113P63132 956 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 ERVK-8P63133 956 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 GABRA6Q16445 453 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 GLYR1Q49A26 553 aaPredicted RBP4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 AARS2Q5JTZ9 985 aaKnown RBP4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 ZDHHC24Q6UX98 284 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 CYHR1Q6ZMK1 362 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 RAPH1Q70E73 1250 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 SBSPONQ8IVN8 264 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 CDK20Q8IZL9 346 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 Q8N1X5 172 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 PARP8Q8N3A8 854 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 STYXQ8WUJ0 223 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 ZNF75CPQ92670 426 aaPredicted RBP4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 R3HDM4Q96D70 268 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 MS4A6EQ96DS6 147 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 ITCHQ96J02 903 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 AGPAT1Q99943 283 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 TBCDQ9BTW9 1192 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 ERVK-6Q9BXR3 956 aa4.36□□□□□ -1.71
SBDSP1-204ENST00000453858 PCBD2Q9H0N5 130 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms