RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 DOK1Q99704 481 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 STK33Q9BYT3 514 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 TMEM184CQ9NVA4 438 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 RLIMQ9NVW2 624 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 COPS7AQ9UBW8 275 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 GLS2Q9UI32 602 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 DKKL1Q9UK85 242 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 RCOR1Q9UKL0 485 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 CFAP45Q9UL16 551 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 SLC25A15Q9Y619 301 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 ARHGAP32A7KAX9 2087 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 A0A087WUV0 522 aaPredicted RBP4.12□□□□□ -1.75
SDCBP-205ENST00000447267 TMEM129A0AVI4 362 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 FAM25EA8MYX2 175 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 C9JVG2 144 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 hCG_2039718K7EN88 272 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 CXCL13O43927 109 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 LDB3O75112 727 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 RAD51DO75771 328 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 PGM3O95394 542 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 IGHV2-5P01817 119 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 IGHV4-59P01825 116 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 SLC35G6P0C7Q6 338 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 OR56A5P0C7T3 313 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 PRB4P10163 310 aaPredicted RBP4.12□□□□□ -1.75
SDCBP-205ENST00000447267 CD28P10747 220 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 FCGR2AP12318 317 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 IGHV1-2P23083 117 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 CNTFP26441 200 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 LIPAP38571 399 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 PIK3CGP48736 1102 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 TMEM33P57088 247 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 CTAG1AP78358 180 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 ABATP80404 500 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 ZNF154Q13106 437 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 SRSF7Q16629 238 aaKnown RBP eCLIP4.12□□□□□ -1.75
SDCBP-205ENST00000447267 PPP1R3AQ16821 1122 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 TEX44Q53QW1 395 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 MTX3Q5HYI7 312 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 ISM2Q6H9L7 571 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 SLC35E4Q6ICL7 350 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 TBC1D1Q86TI0 1168 aaPredicted RBP4.12□□□□□ -1.75
SDCBP-205ENST00000447267 TUSC5Q8IXB3 177 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 CDK20Q8IZL9 346 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 METTL25Q8N6Q8 603 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 SMYD1Q8NB12 490 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 IPMKQ8NFU5 416 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 OR4F17Q8NGA8 305 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 OR10S1Q8NGN2 331 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 OR9A1PQ8NGU1 263 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 SVIPQ8NHG7 77 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 SLC35B4Q969S0 331 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 OLFM3Q96PB7 478 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 OR4F4Q96R69 305 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 PRR25Q96S07 402 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 EBNA1BP2Q99848 306 aaKnown RBP4.12□□□□□ -1.75
SDCBP-205ENST00000447267 C19orf43Q9BQ61 176 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 APOL2Q9BQE5 337 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 ALG8Q9BVK2 526 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 OSBPL10Q9BXB5 764 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 QTRT1Q9BXR0 403 aaKnown RBP4.12□□□□□ -1.75
SDCBP-205ENST00000447267 WWTR1Q9GZV5 400 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 GANQ9H2C0 597 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 MRPL46Q9H2W6 279 aaKnown RBP4.12□□□□□ -1.75
SDCBP-205ENST00000447267 CA10Q9NS85 328 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 PARVAQ9NVD7 372 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 EHD3Q9NZN3 535 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 ASIC3Q9UHC3 531 aa4.12□□□□□ -1.75
SDCBP-205ENST00000447267 LEF1Q9UJU2 399 aaPredicted RBP4.12□□□□□ -1.75
SDCBP-205ENST00000447267 A0A1B0GVY2 172 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 OR51F1A6NGY5 319 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 EFCAB8A8MWE9 144 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 H0YIZ8 118 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 KIF2AO00139 706 aaPredicted RBP4.11□□□□□ -1.75
SDCBP-205ENST00000447267 ATP8B1O43520 1251 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 OR1F1O43749 312 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 AHCYL1O43865 530 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 B3GALNT1O75752 331 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 IGKV3-11P04433 115 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 ABCB1P08183 1280 aaPredicted RBP4.11□□□□□ -1.75
SDCBP-205ENST00000447267 RHOXF2BP0C7M4 288 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 ACHEP22303 614 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 MPGP29372 298 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 HNRNPH1P31943 449 aaKnown RBP4.11□□□□□ -1.75
SDCBP-205ENST00000447267 RPS3AP61247 264 aaKnown RBP4.11□□□□□ -1.75
SDCBP-205ENST00000447267 BTN3A2P78410 334 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 STX4Q12846 297 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 COX10Q12887 443 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 SLMAPQ14BN4 828 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 RASA2Q15283 850 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 EFNB3Q15768 340 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 GRAMD1BQ3KR37 738 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 LRRC23Q53EV4 343 aaPredicted RBP4.11□□□□□ -1.75
SDCBP-205ENST00000447267 AARS2Q5JTZ9 985 aaKnown RBP4.11□□□□□ -1.75
SDCBP-205ENST00000447267 RAET1LQ5VY80 246 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 FAM205BPQ63HN1 556 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 NHLRC1Q6VVB1 395 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 C1orf122Q6ZSJ8 110 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 GALNT10Q86SR1 603 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 PLCZ1Q86YW0 608 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms