RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 TESCQ96BS2 214 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 YIPF6Q96EC8 236 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 PDXPQ96GD0 296 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 MSANTD3Q96H12 275 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 NSMCE2Q96MF7 247 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 OR52B2Q96RD2 323 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 ZNF300Q96RE9 604 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 CYP2S1Q96SQ9 504 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 SECISBP2Q96T21 854 aaKnown RBP3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 EPYCQ99645 322 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 IL12RB2Q99665 862 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 RBBP8Q99708 897 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 APOL2Q9BQE5 337 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 SLC30A2Q9BRI3 323 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 TCEAL7Q9BRU2 100 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 FAM213AQ9BRX8 229 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 MND1Q9BWT6 205 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 SLIRPQ9GZT3 109 aaKnown RBP3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 PIGUQ9H490 435 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 NMRAL1Q9HBL8 299 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 ZFP14Q9HCL3 533 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 FAM49BQ9NUQ9 324 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 DCAF16Q9NXF7 216 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 BFARQ9NZS9 450 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 FLRT3Q9NZU0 649 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 TMEM216Q9P0N5 145 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 UBQLN2Q9UHD9 624 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 ZNF580Q9UK33 172 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 CDH9Q9ULB4 789 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 EMCNQ9ULC0 261 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 ING4Q9UNL4 249 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 TRAPPC4Q9Y296 219 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 AUP1Q9Y679 476 aa3.97□□□□□ -1.77
HMGB1P16-201ENST00000447155 BCLAF3A2AJT9 711 aaKnown RBP3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 MEIOCA2RUB1 952 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 PRORSD1PA6NEY8 169 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 OR6C70A6NIJ9 312 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 OR5K4A6NMS3 321 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 LEUTXA8MZ59 168 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 WRBO00258 174 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 NR5A2O00482 541 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 INPP4BO15327 924 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 PRPSAP2O60256 369 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 ACSL4O60488 711 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 GMDSO60547 372 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 HCN1O60741 890 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 TSPAN12O95859 305 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 FADS2O95864 444 aaKnown RBP3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 FTH1P02794 183 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 ALPPP05187 535 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 C2P06681 752 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 S100A9P06702 114 aaKnown RBP3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 PRSS1P07477 247 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 HMBSP08397 361 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 FRMD6-AS1P0C7T7 363 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 SUPT20HL2P0C7V6 817 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 SMIM6P0DI80 62 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 IGHV4-31P0DP07 118 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 SPP1P10451 314 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 PRKAR1AP10644 381 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 HLA-EP13747 358 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 ELK4P28324 431 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 TIA1P31483 386 aaKnown RBP eCLIP3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 RORAP35398 523 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 NUP62P37198 522 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 MAGEA3P43357 314 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 NPY2RP49146 381 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 STARP49675 285 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 GMPSP49915 693 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 GDI2P50395 445 aaKnown RBP3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 KCNK10P57789 538 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 SNAP25P60880 206 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 IL5RAQ01344 420 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 SLC25A11Q02978 314 aaKnown RBP3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 HSF2Q03933 536 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 GBE1Q04446 702 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 CUL2Q13617 745 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 CARTPTQ16568 116 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 TAZQ16635 292 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 LRRC26Q2I0M4 334 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 CTU2Q2VPK5 515 aaKnown RBP3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 LCN1P1Q5VSP4 162 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 ZNF691Q5VV52 312 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 TMEM236Q5W0B7 351 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 TXNRD3NBQ6F5E7 133 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 SLC35E4Q6ICL7 350 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 OR4A47Q6IF82 309 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 CNSTQ6PJW8 725 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 PLET1Q6UQ28 207 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 RBMS3Q6XE24 437 aaKnown RBP3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 SLC26A9Q7LBE3 791 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 PIWIL3Q7Z3Z3 882 aaKnown RBP3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 PRSS42Q7Z5A4 293 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 TRPT1Q86TN4 253 aaKnown RBP3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 AMIGO1Q86WK6 493 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 HIPK1Q86Z02 1210 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 SLC22A9Q8IVM8 553 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 PHC2Q8IXK0 858 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 C4orf19Q8IY42 314 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 UBE2J2Q8N2K1 259 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms