RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 SKA3Q8IX90 412 aa2.71□□□□□ -1.98
AC003001.1-201ENST00000443247 DQX1Q8TE96 717 aaKnown RBP2.71□□□□□ -1.98
AC003001.1-201ENST00000443247 C7orf33Q8WU49 177 aa2.71□□□□□ -1.98
AC003001.1-201ENST00000443247 SRSF12Q8WXF0 261 aaKnown RBP2.71□□□□□ -1.98
AC003001.1-201ENST00000443247 UPRTQ96BW1 309 aa2.71□□□□□ -1.98
AC003001.1-201ENST00000443247 TMEM101Q96IK0 257 aa2.71□□□□□ -1.98
AC003001.1-201ENST00000443247 NSMCE2Q96MF7 247 aa2.71□□□□□ -1.98
AC003001.1-201ENST00000443247 RUFY1Q96T51 708 aa2.71□□□□□ -1.98
AC003001.1-201ENST00000443247 COMMD4Q9H0A8 199 aa2.71□□□□□ -1.98
AC003001.1-201ENST00000443247 RPAP3Q9H6T3 665 aaPredicted RBP2.71□□□□□ -1.98
AC003001.1-201ENST00000443247 COG4Q9H9E3 785 aa2.71□□□□□ -1.98
AC003001.1-201ENST00000443247 NANSQ9NR45 359 aa2.71□□□□□ -1.98
AC003001.1-201ENST00000443247 ANO10Q9NW15 660 aa2.71□□□□□ -1.98
AC003001.1-201ENST00000443247 UTP6Q9NYH9 597 aaKnown RBP2.71□□□□□ -1.98
AC003001.1-201ENST00000443247 IL19Q9UHD0 177 aa2.71□□□□□ -1.98
AC003001.1-201ENST00000443247 SH3BGRL2Q9UJC5 107 aa2.71□□□□□ -1.98
AC003001.1-201ENST00000443247 EIF3LQ9Y262 564 aaKnown RBP2.71□□□□□ -1.98
AC003001.1-201ENST00000443247 USP16Q9Y5T5 823 aa2.71□□□□□ -1.98
AC003001.1-201ENST00000443247 C5P01031 1676 aa2.71□□□□□ -1.98
AC003001.1-201ENST00000443247 FAM208AQ9UK61 1670 aaKnown RBP2.71□□□□□ -1.98
AC003001.1-201ENST00000443247 ABCC6O95255 1503 aa2.71□□□□□ -1.98
AC003001.1-201ENST00000443247 DOT1LQ8TEK3 1739 aa2.71□□□□□ -1.98
AC003001.1-201ENST00000443247 TECPR2O15040 1411 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 ANKRD50Q9ULJ7 1429 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 A0A0J9YXY3 114 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 LGALS8O00214 317 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 BBOX1O75936 387 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 XRCC1P18887 633 aaPredicted RBP2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 CD1BP29016 333 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 UGT1A5P35504 534 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 HTD2P86397 168 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 CDKN3Q16667 212 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 TMEM52BQ4KMG9 183 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 TFDP3Q5H9I0 405 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 TOR1AIP1Q5JTV8 583 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 SCYL2Q6P3W7 929 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 CYS1Q717R9 158 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 LPCAT2Q7L5N7 544 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 C17orf82Q86X59 251 aaPredicted RBP2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 HDDC3Q8N4P3 179 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 ZSCAN4Q8NAM6 433 aaPredicted RBP2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 ANKRD20A12PQ8NF67 263 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 OR9A1PQ8NGU1 263 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 NCLNQ969V3 563 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 SLC35E1Q96K37 410 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 C16orf45Q96MC5 204 aaPredicted RBP2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 SLC25A51Q9H1U9 297 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 LIN28AQ9H9Z2 209 aaKnown RBP2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 NINJ2Q9NZG7 142 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 CNOT2Q9NZN8 540 aaKnown RBP2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 HOOK1Q9UJC3 728 aaKnown RBP2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 UBQLN1Q9UMX0 589 aaKnown RBP2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 SMC3Q9UQE7 1217 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 NUDCQ9Y266 331 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 WDR45Q9Y484 360 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 EIF3AQ14152 1382 aaKnown RBP2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 TAF1LQ8IZX4 1826 aa2.7□□□□□ -1.98
AC003001.1-201ENST00000443247 USP54Q70EL1 1684 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 RGPD5Q99666 1765 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 SSH2Q76I76 1423 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 ANKARQ7Z5J8 1434 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 GOLGB1Q14789 3259 aaKnown RBP2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 RNF103-CHMP3A0A140T963 221 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 RNF222A6NCQ9 220 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 LRRC30A6NM36 301 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 WASHC1A8K0Z3 465 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 MAGEB4O15481 346 aaPredicted RBP2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 IGHV3-48P01763 117 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 ANXA3P12429 323 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 KIR2DS2P43631 304 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 ST3GAL3Q11203 375 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 EXOSC2Q13868 293 aaKnown RBP2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 PDIA5Q14554 519 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 TMEM184AQ6ZMB5 413 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 DNM1P46Q6ZS02 220 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 LRRC70Q7Z2Q7 622 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 MRPL43Q8N983 215 aaKnown RBP2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 ZNF540Q8NDQ6 660 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 OR2AP1Q8NGE2 309 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 ATG10Q9H0Y0 220 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 POLR3FQ9H1D9 316 aaPredicted RBP2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 HSD3B7Q9H2F3 369 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 NARFLQ9H6Q4 476 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 PAK1IP1Q9NWT1 392 aaPredicted RBP2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 TAS2R3Q9NYW6 316 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 ACTR3BQ9P1U1 418 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 RIMS3Q9UJD0 308 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 PIN4Q9Y237 131 aaKnown RBP2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 IFT52Q9Y366 437 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 MAB21L2Q9Y586 359 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 VIRMAQ69YN4 1812 aaKnown RBP2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 BRD4O60885 1362 aaPredicted RBP2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 PLEKHG2Q9H7P9 1386 aa2.69□□□□□ -1.98
AC003001.1-201ENST00000443247 IGLV3-16A0A075B6K0 115 aa2.68□□□□□ -1.98
AC003001.1-201ENST00000443247 LOC100131303A0A0U1RQF7 123 aa2.68□□□□□ -1.98
AC003001.1-201ENST00000443247 A0A1B0GUA9 196 aa2.68□□□□□ -1.98
AC003001.1-201ENST00000443247 RGSL1A5PLK6 1076 aa2.68□□□□□ -1.98
AC003001.1-201ENST00000443247 K7EPI3 171 aa2.68□□□□□ -1.98
AC003001.1-201ENST00000443247 ZNF264O43296 627 aa2.68□□□□□ -1.98
AC003001.1-201ENST00000443247 STX11O75558 287 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms