RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 RPL13AP3Q6NVV1 102 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 PGBD2Q6P3X8 592 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 PAPD4Q6PIY7 484 aaKnown RBP3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 KLHL17Q6TDP4 642 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 CASP12Q6UXS9 341 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 SHISA6Q6ZSJ9 500 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 LANCL3Q6ZV70 420 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 NDUFAF7Q7L592 441 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 OLIG3Q7RTU3 272 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 NUP54Q7Z3B4 507 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 GDF7Q7Z4P5 450 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 HMGN2P46Q86SG4 172 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 PIP4P1Q86T03 277 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 COMTD1Q86VU5 262 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 LACC1Q8IV20 430 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 MISPQ8IVT2 679 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 C9orf40Q8IXQ3 194 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 DND1Q8IYX4 353 aaKnown RBP3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 SLC43A2Q8N370 569 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 ESX1Q8N693 406 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 CLDN22Q8N7P3 220 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF614Q8N883 585 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF441Q8N8Z8 693 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 OR4N2Q8NGD1 307 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 OR4K5Q8NGD3 323 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 OR2Y1Q8NGV0 311 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 RHOXF1Q8NHV9 184 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 M1APQ8TC57 530 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 ADAMTS16Q8TE57 1224 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 IPCEF1Q8WWN9 437 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 CNOT9Q92600 299 aaKnown RBP3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 OSTF1Q92882 214 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF566Q969W8 418 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 EFHD2Q96C19 240 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 TMCO6Q96DC7 493 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 OMA1Q96E52 524 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 ADOQ96SZ5 270 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 WFDC6Q9BQY6 131 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 CDADC1Q9BWV3 514 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 RSPO3Q9BXY4 272 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 GPR87Q9BY21 358 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 DEFB126Q9BYW3 111 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 PRRG3Q9BZD7 231 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 TBL1XR1Q9BZK7 514 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 SLC19A3Q9BZV2 496 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 FAM192AQ9GZU8 254 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 LAT2Q9GZY6 243 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 ADNPQ9H2P0 1102 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 CCNB1IP1Q9NPC3 277 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 SDHAF3Q9NRP4 125 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 MAN2C1Q9NTJ4 1040 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 PLCXD1Q9NUJ7 323 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 RLIMQ9NVW2 624 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 IMPAD1Q9NX62 359 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 KCNE5Q9UJ90 142 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 DTX4Q9Y2E6 619 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 TPRKBQ9Y3C4 175 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 PTRH2Q9Y3E5 179 aaKnown RBP3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 CHST2Q9Y4C5 530 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 PCDHGB6Q9Y5F9 930 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 AHCTF1Q8WYP5 2266 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 CFAP54Q96N23 3096 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 A0A087WUU8 490 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 NPIPA5A0A0B4J1W7 369 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 A0A0B4J2E0 115 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 TRBV11-1A0A0K0K1C0 115 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 CENPVL1A0A0U1RR11 272 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 SMIM31A0A1B0GVY4 71 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 A0A1B0GWA3 101 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 A0A1B0GX12 115 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 TMEM82A0PJX8 343 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 DPPA5A6NC42 116 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 EFCAB10A6NFE3 127 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 UNC119BA6NIH7 251 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 TRIM64CA6NLI5 447 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 CLDN24A6NM45 220 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 SNTNA6NMZ2 147 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZAR1LA6NP61 321 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 C21orf140B9A014 251 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 ALG1L2C9J202 215 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 NPIPA7E9PJI5 369 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 H3BN98 237 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 M0R3G1 203 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 AGRPO00253 132 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 TP53I11O14683 189 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 FRS3O43559 492 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 CHP2O43745 196 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 FADS1O60427 444 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 FAM20BO75063 409 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 CNOT3O75175 753 aaKnown RBP3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 KLF7O75840 302 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 OR6B1O95007 311 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 RCBTB2O95199 551 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 CLIC3O95833 236 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 ANGPTL1O95841 491 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 IGF2P01344 180 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 HMGN1P05114 100 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 RNASE1P07998 156 aaKnown RBP3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 GKN3PP0CG01 181 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 NPIPA8P0DM63 369 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms