RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 COPG1Q9Y678 874 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-208ENST00000436638 VPS13AQ96RL7 3174 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 A0A075B6Q4 140 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 TRBV23-1A0A0A0MS06 115 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 PRSS51A0A1B0GVH4 220 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 A0A1W2PQ72 361 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 A0A1W2PS29 197 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 EFCAB10A6NFE3 127 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 A6NL46 340 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 OR6C76A6NM76 312 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 A8MUI8 341 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 C9JVG2 144 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 MKRN2OSH3BPM6 223 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 WRBO00258 174 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 RNASET2O00584 256 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 FCHO1O14526 889 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 RFXANKO14593 260 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 SMAD9O15198 467 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 PRAMEF2O60811 474 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 SEMA7AO75326 666 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 RHBDL1O75783 438 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 DCTN3O75935 186 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 CCNB2O95067 398 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 AKR7A3O95154 331 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 RAB3DO95716 219 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 C6orf47O95873 294 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 FAM107AO95990 144 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 APOA1P02647 267 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 EFNA1P20827 205 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 GPX3P22352 226 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 CALB2P22676 271 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 CD1BP29016 333 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 CASRP41180 1078 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 CASP3P42574 277 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 CDKN1BP46527 198 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 MRPL19P49406 292 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 EFNA3P52797 238 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 DGKQP52824 942 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 PRKAG1P54619 331 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 PRR5P85299 388 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 PMP22Q01453 160 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 ZNHIT3Q15649 155 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 LTB4RQ15722 352 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 CEBPEQ15744 281 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 PRICKLE4Q2TBC4 344 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 HFEQ30201 348 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 ZNF829Q3KNS6 432 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 TBRG1Q3YBR2 411 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 LACTB2Q53H82 288 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 C6orf10Q5SRN2 563 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 SPATA46Q5T0L3 261 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 ABHD17BQ5VST6 288 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 AGAP7PQ5VUJ5 663 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 BICRALQ6AI39 1079 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 C3orf33Q6P1S2 294 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 TTC33Q6PID6 262 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 TRAT1Q6PIZ9 186 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 TMEM107Q6UX40 140 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 HSDL2Q6YN16 418 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 TRPM8Q7Z2W7 1104 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 ZNF551Q7Z340 670 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 RIMKLAQ8IXN7 391 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 GALNT16Q8N428 558 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 CPSF7Q8N684 471 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 CCDC197Q8NCU1 140 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 BHLHE23Q8NDY6 225 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 OR52R1Q8NGF1 315 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 OR8J2Q8NGG1 315 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 OR1N1Q8NGS0 311 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 ZNF675Q8TD23 568 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 DOK4Q8TEW6 326 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 PAQR8Q8TEZ7 354 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 ZNF721Q8TF20 911 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 PTPMT1Q8WUK0 201 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 LRTOMTQ8WZ04 291 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 TM9SF4Q92544 642 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 DIO2Q92813 273 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 KAT2AQ92830 837 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 MUL1Q969V5 352 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 MOAP1Q96BY2 351 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 FBXL20Q96IG2 436 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 ITCHQ96J02 903 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 IMMP1LQ96LU5 166 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 ZNF354BQ96LW1 612 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 AMDHD1Q96NU7 426 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 AGAP4Q96P64 663 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 PANX1Q96RD7 426 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 GAL3ST4Q96RP7 486 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 WDR77Q9BQA1 342 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 SLC25A23Q9BV35 468 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 TEX12Q9BXU0 123 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 ITPAQ9BY32 194 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 QRSL1Q9H0R6 528 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 GLIPR2Q9H4G4 154 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 CXorf21Q9HAI6 301 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 MMP25Q9NPA2 562 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 OBP2BQ9NPH6 170 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 TBC1D23Q9NUY8 699 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 TAS2R10Q9NYW0 307 aa5.68□□□□□ -1.5
ECHDC1-208ENST00000436638 TAS2R9Q9NYW1 312 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms