RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 SAP130Q9H0E3 1048 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 MTHFD2LQ9H903 347 aaPredicted RBP8.26□□□□□ -1.09
NUP50-206ENST00000422489 KLHL9Q9P2J3 617 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 PRSS50Q9UI38 385 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 LIPT1Q9Y234 373 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 SPIN1Q9Y657 262 aaPredicted RBP8.26□□□□□ -1.09
NUP50-206ENST00000422489 ANKRD17O75179 2603 aaKnown RBP8.25□□□□□ -1.09
NUP50-206ENST00000422489 ZNF814B7Z6K7 855 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 AP3D1O14617 1153 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 SMAD7O15105 426 aaKnown RBP8.25□□□□□ -1.09
NUP50-206ENST00000422489 SMAD9O15198 467 aaKnown RBP8.25□□□□□ -1.09
NUP50-206ENST00000422489 UBDO15205 165 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 CLOCKO15516 846 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 IL6P05231 212 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 FESP07332 822 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 GUSBP08236 651 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 NUDT7P0C024 238 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 IDO1P14902 403 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 FOSL1P15407 271 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 IL7RP16871 459 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 PSMB1P20618 241 aaKnown RBP8.25□□□□□ -1.09
NUP50-206ENST00000422489 LOXP28300 417 aaPredicted RBP8.25□□□□□ -1.09
NUP50-206ENST00000422489 CRATP43155 626 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 NR1H2P55055 460 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 LRRC74AQ0VAA2 488 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 FUT5Q11128 374 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 GNA13Q14344 377 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 P2RY6Q15077 328 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 STK11Q15831 433 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 SYT14P1Q58G82 188 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 Q5PR19 223 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 COX20Q5RI15 118 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 TFAP2EQ6VUC0 442 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 DNAJC14Q6Y2X3 702 aaPredicted RBP8.25□□□□□ -1.09
NUP50-206ENST00000422489 C20orf204Q6ZNR8 217 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 LRRC74BQ6ZQY2 392 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 BHLHA15Q7RTS1 189 aaPredicted RBP8.25□□□□□ -1.09
NUP50-206ENST00000422489 GALNT5Q7Z7M9 940 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 GABRG1Q8N1C3 465 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 UBE2J2Q8N2K1 259 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 GLB1L3Q8NCI6 653 aaPredicted RBP8.25□□□□□ -1.09
NUP50-206ENST00000422489 RAB3IL1Q8TBN0 382 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 WDR60Q8WVS4 1066 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 HSD17B8Q92506 261 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 ZNF75CPQ92670 426 aaPredicted RBP8.25□□□□□ -1.09
NUP50-206ENST00000422489 ZHX1-C8orf76Q96EF9 292 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 C18orf12Q96KH6 178 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 TRNT1Q96Q11 434 aaKnown RBP8.25□□□□□ -1.09
NUP50-206ENST00000422489 ZNF300Q96RE9 604 aaPredicted RBP8.25□□□□□ -1.09
NUP50-206ENST00000422489 PIP5K1AQ99755 562 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 SMR3AQ99954 134 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 PSD2Q9BQI7 771 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 GP6Q9HCN6 339 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 NGBQ9NPG2 151 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 CHRNA9Q9UGM1 479 aa8.25□□□□□ -1.09
NUP50-206ENST00000422489 TMED7-TICAM2A0A0A6YYA0 188 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 ETV2O00321 342 aaPredicted RBP8.24□□□□□ -1.09
NUP50-206ENST00000422489 CYTIPO60759 359 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 DNAJA2O60884 412 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 GCM2O75603 506 aaPredicted RBP8.24□□□□□ -1.09
NUP50-206ENST00000422489 LYZL6O75951 148 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 IGHV3-9P01782 118 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 DBIP07108 87 aaKnown RBP8.24□□□□□ -1.09
NUP50-206ENST00000422489 CD3EP07766 207 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 CHRM4P08173 479 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 ETFAP13804 333 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 NID1P14543 1247 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 OR3A2P47893 321 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 POLR2JP52435 117 aaKnown RBP8.24□□□□□ -1.09
NUP50-206ENST00000422489 SLC18A1P54219 525 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 LSM11P83369 360 aaKnown RBP eCLIP8.24□□□□□ -1.09
NUP50-206ENST00000422489 ITGADQ13349 1161 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 TAB1Q15750 504 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 GSTA3Q16772 222 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 PDCD4Q53EL6 469 aaKnown RBP8.24□□□□□ -1.09
NUP50-206ENST00000422489 C6orf10Q5SRN2 563 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 BEND6Q5SZJ8 279 aaPredicted RBP8.24□□□□□ -1.09
NUP50-206ENST00000422489 GRINAQ7Z429 371 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 YTHDF3Q7Z739 585 aaKnown RBP8.24□□□□□ -1.09
NUP50-206ENST00000422489 MTDHQ86UE4 582 aaKnown RBP8.24□□□□□ -1.09
NUP50-206ENST00000422489 LSRQ86X29 649 aaPredicted RBP8.24□□□□□ -1.09
NUP50-206ENST00000422489 ADGRG3Q86Y34 549 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 CCDC103Q8IW40 242 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 PEX5LQ8IYB4 626 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 OR52P1PQ8NH57 321 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 PIWIL2Q8TC59 973 aaKnown RBP8.24□□□□□ -1.09
NUP50-206ENST00000422489 SLC25A43Q8WUT9 341 aaPredicted RBP8.24□□□□□ -1.09
NUP50-206ENST00000422489 TMEM171Q8WVE6 324 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 AKAP1Q92667 903 aaKnown RBP eCLIP8.24□□□□□ -1.09
NUP50-206ENST00000422489 TLCD1Q96CP7 247 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 ITCHQ96J02 903 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 Q96MF0 132 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 OR52B2Q96RD2 323 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 CCDC106Q9BWC9 280 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 OR11A1Q9GZK7 315 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 OR10A4Q9H209 315 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 SLC38A1Q9H2H9 487 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 RMND5AQ9H871 391 aa8.24□□□□□ -1.09
NUP50-206ENST00000422489 ING1Q9UK53 422 aaPredicted RBP8.24□□□□□ -1.09
NUP50-206ENST00000422489 TMED7Q9Y3B3 224 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms