RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 FBRSQ9HAH7 460 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 EMC7Q9NPA0 242 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 SIRT5Q9NXA8 310 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 A0A0J9YY10 115 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 MEGF11A6BM72 1044 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 PIP5K1CO60331 668 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 B4GALT3O60512 393 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 DNAJB6O75190 326 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 GPR75O95800 540 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 PTPN6P29350 595 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 SLC48A1Q6P1K1 146 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 CPNE2Q96FN4 548 aaPredicted RBP16.23■□□□□ 0.19
PTPRU-202ENST00000373779 URM1Q9BTM9 101 aaKnown RBP16.23■□□□□ 0.19
PTPRU-202ENST00000373779 CYP8B1Q9UNU6 501 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 MRPS17Q9Y2R5 130 aaKnown RBP16.23■□□□□ 0.19
PTPRU-202ENST00000373779 MYO10Q9HD67 2058 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 VNN2O95498 520 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 LSSP48449 732 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 FOXK2Q01167 660 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 RTL10Q7L3V2 364 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 LGALS14Q8TCE9 139 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 ATG4BQ9Y4P1 393 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 M0R082 166 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 PVALBP20472 110 aaPredicted RBP16.23■□□□□ 0.19
PTPRU-202ENST00000373779 PCMT1P22061 227 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 RAP2BP61225 183 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 SIAH3Q8IW03 269 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 LINC01599Q8WXQ3 324 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 CHST8Q9H2A9 424 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 STARD5Q9NSY2 213 aa16.23■□□□□ 0.19
PTPRU-202ENST00000373779 MEIS3P1A6NDR6 274 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 RAD1O60671 282 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 PRSS23O95084 383 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 C1QBP02746 253 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 AMY2BP19961 511 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 SOX9P48436 509 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 RNF165Q6ZSG1 346 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 HIST1H2AAQ96QV6 131 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 UBQLN3Q9H347 655 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 NRIP3Q9NQ35 241 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 PRSS38A1L453 326 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 SIRPAP78324 504 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 MFSD4AQ8N468 514 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 INTS14Q96SY0 518 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 PPA2Q9H2U2 334 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 SLC6A5Q9Y345 797 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 ZNF831Q5JPB2 1677 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 TVP23AA6NH52 213 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 CHP2O43745 196 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 LILRB3O75022 631 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 ALX3O95076 343 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 PSMB1P20618 241 aaKnown RBP16.22■□□□□ 0.19
PTPRU-202ENST00000373779 HNRNPA2B1P22626 353 aaKnown RBP16.22■□□□□ 0.19
PTPRU-202ENST00000373779 CLDN2P57739 230 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 NKPD1Q17RQ9 610 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 PRAMEF8Q5VWM4 474 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 PRAMEF7Q5VXH5 474 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 APOBEC3BQ9UH17 382 aaKnown RBP16.22■□□□□ 0.19
PTPRU-202ENST00000373779 YARS2Q9Y2Z4 477 aaKnown RBP16.22■□□□□ 0.19
PTPRU-202ENST00000373779 OR2T7P0C7T2 308 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 FBLP22087 321 aaKnown RBP16.22■□□□□ 0.19
PTPRU-202ENST00000373779 GALEQ14376 348 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 UBXN2BQ14CS0 331 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 KIAA0040Q15053 153 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 TCTN3Q6NUS6 607 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 ABHD17CQ6PCB6 329 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 TMPRSS9Q7Z410 1059 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 MCEMP1Q8IX19 187 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 OR2T27Q8NH04 317 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 FCRL1Q96LA6 429 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 PHB2Q99623 299 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 LRRC37AA6NMS7 1700 aa16.22■□□□□ 0.19
PTPRU-202ENST00000373779 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.21■□□□□ 0.19
PTPRU-202ENST00000373779 BCL6P41182 706 aa16.21■□□□□ 0.19
PTPRU-202ENST00000373779 BTG1P62324 171 aa16.21■□□□□ 0.19
PTPRU-202ENST00000373779 CRMP1Q14194 572 aa16.21■□□□□ 0.19
PTPRU-202ENST00000373779 BCL7CQ8WUZ0 217 aaPredicted RBP16.21■□□□□ 0.19
PTPRU-202ENST00000373779 TNFRSF13CQ96RJ3 184 aa16.21■□□□□ 0.19
PTPRU-202ENST00000373779 FKBP14Q9NWM8 211 aa16.21■□□□□ 0.19
PTPRU-202ENST00000373779 MN1Q10571 1320 aaPredicted RBP16.21■□□□□ 0.19
PTPRU-202ENST00000373779 ZNF705EA8MWA4 302 aaPredicted RBP16.21■□□□□ 0.19
PTPRU-202ENST00000373779 K7ESM1 405 aa16.21■□□□□ 0.19
PTPRU-202ENST00000373779 SRPX2O60687 465 aaPredicted RBP16.21■□□□□ 0.19
PTPRU-202ENST00000373779 UBL4AP11441 157 aa16.21■□□□□ 0.19
PTPRU-202ENST00000373779 B4GALNT1Q00973 533 aa16.21■□□□□ 0.19
PTPRU-202ENST00000373779 LTBQ06643 244 aa16.21■□□□□ 0.19
PTPRU-202ENST00000373779 EIF2B1Q14232 305 aaKnown RBP16.21■□□□□ 0.19
PTPRU-202ENST00000373779 TMEM225Q6GV28 225 aa16.21■□□□□ 0.19
PTPRU-202ENST00000373779 DEFB119Q8N690 84 aa16.21■□□□□ 0.19
PTPRU-202ENST00000373779 PNPLA2Q96AD5 504 aa16.21■□□□□ 0.19
PTPRU-202ENST00000373779 SGPP1Q9BX95 441 aa16.21■□□□□ 0.19
PTPRU-202ENST00000373779 ZDHHC5Q9C0B5 715 aa16.21■□□□□ 0.19
PTPRU-202ENST00000373779 LTBP4Q8N2S1 1624 aa16.21■□□□□ 0.19
PTPRU-202ENST00000373779 ACOD1A6NK06 481 aa16.21■□□□□ 0.19
PTPRU-202ENST00000373779 ESCO2Q56NI9 601 aa16.21■□□□□ 0.19
PTPRU-202ENST00000373779 ASB12Q8WXK4 309 aa16.21■□□□□ 0.19
PTPRU-202ENST00000373779 ZNF700Q9H0M5 742 aa16.21■□□□□ 0.19
PTPRU-202ENST00000373779 ZNF701Q9NV72 531 aaPredicted RBP16.21■□□□□ 0.19
PTPRU-202ENST00000373779 A0A087WUU8 490 aa16.21■□□□□ 0.19
PTPRU-202ENST00000373779 B4DXG7 233 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms