RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 GTF2IRD2BQ6EKJ0 949 aa17.23■□□□□ 0.35
SYNE4-202ENST00000340477 GTF2IRD2Q86UP8 949 aa17.23■□□□□ 0.35
SYNE4-202ENST00000340477 SLC30A8Q8IWU4 369 aa17.23■□□□□ 0.35
SYNE4-202ENST00000340477 HIPK4Q8NE63 616 aa17.23■□□□□ 0.35
SYNE4-202ENST00000340477 OSTF1Q92882 214 aa17.23■□□□□ 0.35
SYNE4-202ENST00000340477 ELAC2Q9BQ52 826 aaKnown RBP17.23■□□□□ 0.35
SYNE4-202ENST00000340477 IKZF5Q9H5V7 419 aa17.23■□□□□ 0.35
SYNE4-202ENST00000340477 GID8Q9NWU2 228 aa17.23■□□□□ 0.35
SYNE4-202ENST00000340477 EMC9Q9Y3B6 208 aa17.23■□□□□ 0.35
SYNE4-202ENST00000340477 UNC79Q9P2D8 2635 aa17.23■□□□□ 0.35
SYNE4-202ENST00000340477 A0A1W2PNV4 684 aa17.22■□□□□ 0.35
SYNE4-202ENST00000340477 PRORSD1PA6NEY8 169 aa17.22■□□□□ 0.35
SYNE4-202ENST00000340477 SERPINB7O75635 380 aa17.22■□□□□ 0.35
SYNE4-202ENST00000340477 TFPIP10646 304 aa17.22■□□□□ 0.35
SYNE4-202ENST00000340477 POLR2HP52434 150 aaKnown RBP17.22■□□□□ 0.35
SYNE4-202ENST00000340477 CTBP2P56545 445 aa17.22■□□□□ 0.35
SYNE4-202ENST00000340477 GNGT1P63211 74 aa17.22■□□□□ 0.35
SYNE4-202ENST00000340477 EPS8Q12929 822 aa17.22■□□□□ 0.35
SYNE4-202ENST00000340477 FOXF2Q12947 444 aa17.22■□□□□ 0.35
SYNE4-202ENST00000340477 CAPRIN1Q14444 709 aaKnown RBP17.22■□□□□ 0.35
SYNE4-202ENST00000340477 BHLHE22Q8NFJ8 381 aaPredicted RBP17.22■□□□□ 0.35
SYNE4-202ENST00000340477 RNASE6Q93091 150 aaKnown RBP17.22■□□□□ 0.35
SYNE4-202ENST00000340477 OR5B2Q96R09 309 aa17.22■□□□□ 0.35
SYNE4-202ENST00000340477 ENKD1Q9H0I2 346 aa17.22■□□□□ 0.35
SYNE4-202ENST00000340477 RNF122Q9H9V4 155 aa17.22■□□□□ 0.35
SYNE4-202ENST00000340477 NPDC1Q9NQX5 325 aaPredicted RBP17.22■□□□□ 0.35
SYNE4-202ENST00000340477 GLRX2Q9NS18 164 aa17.22■□□□□ 0.35
SYNE4-202ENST00000340477 CHRNA9Q9UGM1 479 aa17.22■□□□□ 0.35
SYNE4-202ENST00000340477 CENPEQ02224 2701 aa17.21■□□□□ 0.35
SYNE4-202ENST00000340477 GMNCA6NCL1 334 aa17.21■□□□□ 0.35
SYNE4-202ENST00000340477 FBP2O00757 339 aa17.21■□□□□ 0.35
SYNE4-202ENST00000340477 AP3D1O14617 1153 aa17.21■□□□□ 0.35
SYNE4-202ENST00000340477 PRKAR1BP31321 381 aa17.21■□□□□ 0.35
SYNE4-202ENST00000340477 SLC1A3P43003 542 aa17.21■□□□□ 0.35
SYNE4-202ENST00000340477 DLX5P56178 289 aa17.21■□□□□ 0.35
SYNE4-202ENST00000340477 CSNK2A1P68400 391 aaPredicted RBP17.21■□□□□ 0.35
SYNE4-202ENST00000340477 SIRPAP78324 504 aa17.21■□□□□ 0.35
SYNE4-202ENST00000340477 FBXL19-AS1Q494R0 122 aa17.21■□□□□ 0.35
SYNE4-202ENST00000340477 SYT14P1Q58G82 188 aa17.21■□□□□ 0.35
SYNE4-202ENST00000340477 GDF7Q7Z4P5 450 aa17.21■□□□□ 0.35
SYNE4-202ENST00000340477 KIF18BQ86Y91 864 aa17.21■□□□□ 0.35
SYNE4-202ENST00000340477 SLC35B4Q969S0 331 aa17.21■□□□□ 0.35
SYNE4-202ENST00000340477 ZHX1-C8orf76Q96EF9 292 aa17.21■□□□□ 0.35
SYNE4-202ENST00000340477 GMPPAQ96IJ6 420 aaPredicted RBP17.21■□□□□ 0.35
SYNE4-202ENST00000340477 CTPS2Q9NRF8 586 aa17.21■□□□□ 0.35
SYNE4-202ENST00000340477 RLIMQ9NVW2 624 aa17.21■□□□□ 0.35
SYNE4-202ENST00000340477 KLHL28Q9NXS3 571 aa17.21■□□□□ 0.35
SYNE4-202ENST00000340477 ARMCX1Q9P291 453 aa17.21■□□□□ 0.35
SYNE4-202ENST00000340477 LOC100653049A0A140TA62 436 aa17.2■□□□□ 0.34
SYNE4-202ENST00000340477 SYT5O00445 386 aa17.2■□□□□ 0.34
SYNE4-202ENST00000340477 SMNDC1O75940 238 aaKnown RBP eCLIP17.2■□□□□ 0.34
SYNE4-202ENST00000340477 KRT34O76011 436 aa17.2■□□□□ 0.34
SYNE4-202ENST00000340477 SHC1P29353 583 aa17.2■□□□□ 0.34
SYNE4-202ENST00000340477 MAP2K6P52564 334 aa17.2■□□□□ 0.34
SYNE4-202ENST00000340477 SEC24CP53992 1094 aa17.2■□□□□ 0.34
SYNE4-202ENST00000340477 NCALDP61601 193 aa17.2■□□□□ 0.34
SYNE4-202ENST00000340477 RNPS1Q15287 305 aaKnown RBP17.2■□□□□ 0.34
SYNE4-202ENST00000340477 ZNF239Q16600 458 aaKnown RBP17.2■□□□□ 0.34
SYNE4-202ENST00000340477 INTS11Q5TA45 600 aaKnown RBP17.2■□□□□ 0.34
SYNE4-202ENST00000340477 WBP2NLQ6ICG8 309 aa17.2■□□□□ 0.34
SYNE4-202ENST00000340477 LUZP2Q86TE4 346 aa17.2■□□□□ 0.34
SYNE4-202ENST00000340477 SERPINA11Q86U17 422 aa17.2■□□□□ 0.34
SYNE4-202ENST00000340477 ARMC8Q8IUR7 673 aa17.2■□□□□ 0.34
SYNE4-202ENST00000340477 CADM2Q8N3J6 435 aa17.2■□□□□ 0.34
SYNE4-202ENST00000340477 OR8J3Q8NGG0 315 aa17.2■□□□□ 0.34
SYNE4-202ENST00000340477 RP9Q8TA86 221 aaKnown RBP17.2■□□□□ 0.34
SYNE4-202ENST00000340477 LRRC58Q96CX6 371 aa17.2■□□□□ 0.34
SYNE4-202ENST00000340477 DDIT4LQ96D03 193 aa17.2■□□□□ 0.34
SYNE4-202ENST00000340477 ECSITQ9BQ95 431 aa17.2■□□□□ 0.34
SYNE4-202ENST00000340477 CCDC106Q9BWC9 280 aa17.2■□□□□ 0.34
SYNE4-202ENST00000340477 NBPF19A0A087WUL8 3843 aa17.2■□□□□ 0.34
SYNE4-202ENST00000340477 PKDREJQ9NTG1 2253 aa17.19■□□□□ 0.34
SYNE4-202ENST00000340477 EFNA2O43921 213 aa17.19■□□□□ 0.34
SYNE4-202ENST00000340477 AQP8O94778 261 aa17.19■□□□□ 0.34
SYNE4-202ENST00000340477 GKN3PP0CG01 181 aa17.19■□□□□ 0.34
SYNE4-202ENST00000340477 CXCR1P25024 350 aa17.19■□□□□ 0.34
SYNE4-202ENST00000340477 AQP1P29972 269 aa17.19■□□□□ 0.34
SYNE4-202ENST00000340477 CPOXP36551 454 aa17.19■□□□□ 0.34
SYNE4-202ENST00000340477 CLK1P49759 484 aaKnown RBP17.19■□□□□ 0.34
SYNE4-202ENST00000340477 RAC3P60763 192 aa17.19■□□□□ 0.34
SYNE4-202ENST00000340477 PLAURQ03405 335 aa17.19■□□□□ 0.34
SYNE4-202ENST00000340477 SELPLGQ14242 412 aa17.19■□□□□ 0.34
SYNE4-202ENST00000340477 NANOGP8Q6NSW7 305 aa17.19■□□□□ 0.34
SYNE4-202ENST00000340477 FAM214BQ7L5A3 538 aa17.19■□□□□ 0.34
SYNE4-202ENST00000340477 C10orf111Q8N326 155 aa17.19■□□□□ 0.34
SYNE4-202ENST00000340477 OR10A6Q8NH74 314 aa17.19■□□□□ 0.34
SYNE4-202ENST00000340477 RBM24Q9BX46 236 aaKnown RBP17.19■□□□□ 0.34
SYNE4-202ENST00000340477 TRIM8Q9BZR9 551 aa17.19■□□□□ 0.34
SYNE4-202ENST00000340477 KAT8Q9H7Z6 458 aaKnown RBP17.19■□□□□ 0.34
SYNE4-202ENST00000340477 COQ10BQ9H8M1 238 aa17.19■□□□□ 0.34
SYNE4-202ENST00000340477 EVA1AQ9H8M9 152 aa17.19■□□□□ 0.34
SYNE4-202ENST00000340477 NANOGQ9H9S0 305 aa17.19■□□□□ 0.34
SYNE4-202ENST00000340477 RPS6KB2Q9UBS0 482 aa17.19■□□□□ 0.34
SYNE4-202ENST00000340477 PROCRQ9UNN8 238 aa17.19■□□□□ 0.34
SYNE4-202ENST00000340477 TMED7-TICAM2A0A0A6YYA0 188 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 A0A1W2PNR3 127 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 SULT2B1O00204 365 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 MSTNO14793 375 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 TNFSF13O75888 250 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 IGFBP2P18065 325 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms