RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 SELENONQ9NZV5 590 aa19.33■□□□□ 0.69
VRK2-201ENST00000340157 CUL9Q8IWT3 2517 aa19.33■□□□□ 0.69
VRK2-201ENST00000340157 PTPRBP23467 1997 aa19.33■□□□□ 0.68
VRK2-201ENST00000340157 TRAV27A0A087WT01 109 aa19.33■□□□□ 0.68
VRK2-201ENST00000340157 NSG1A0A0A6YYJ2 146 aa19.33■□□□□ 0.68
VRK2-201ENST00000340157 C2orf72A6NCS6 295 aa19.33■□□□□ 0.68
VRK2-201ENST00000340157 PTP4A3O75365 173 aa19.33■□□□□ 0.68
VRK2-201ENST00000340157 TNFSF15O95150 251 aa19.33■□□□□ 0.68
VRK2-201ENST00000340157 CDK4P11802 303 aa19.33■□□□□ 0.68
VRK2-201ENST00000340157 JUNBP17275 347 aaPredicted RBP19.33■□□□□ 0.68
VRK2-201ENST00000340157 OTX2P32243 289 aa19.33■□□□□ 0.68
VRK2-201ENST00000340157 SLC1A3P43003 542 aa19.33■□□□□ 0.68
VRK2-201ENST00000340157 MASP1P48740 699 aa19.33■□□□□ 0.68
VRK2-201ENST00000340157 MVKQ03426 396 aa19.33■□□□□ 0.68
VRK2-201ENST00000340157 THSD4Q6ZMP0 1018 aa19.33■□□□□ 0.68
VRK2-201ENST00000340157 OR10G3Q8NGC4 313 aa19.33■□□□□ 0.68
VRK2-201ENST00000340157 FANK1Q8TC84 345 aa19.33■□□□□ 0.68
VRK2-201ENST00000340157 GPR83Q9NYM4 423 aa19.33■□□□□ 0.68
VRK2-201ENST00000340157 ZFHX2Q9C0A1 2572 aaPredicted RBP19.32■□□□□ 0.68
VRK2-201ENST00000340157 CLCA1A8K7I4 914 aa19.32■□□□□ 0.68
VRK2-201ENST00000340157 EFCAB9A8MZ26 197 aa19.32■□□□□ 0.68
VRK2-201ENST00000340157 LRRN3E7EW58 273 aa19.32■□□□□ 0.68
VRK2-201ENST00000340157 MT-ND2P03891 347 aa19.32■□□□□ 0.68
VRK2-201ENST00000340157 SAGP10523 405 aaPredicted RBP19.32■□□□□ 0.68
VRK2-201ENST00000340157 PTGDSP41222 190 aa19.32■□□□□ 0.68
VRK2-201ENST00000340157 NUP54Q7Z3B4 507 aa19.32■□□□□ 0.68
VRK2-201ENST00000340157 FAM26EQ8N5C1 309 aa19.32■□□□□ 0.68
VRK2-201ENST00000340157 ESX1Q8N693 406 aa19.32■□□□□ 0.68
VRK2-201ENST00000340157 ZNF563Q8TA94 476 aa19.32■□□□□ 0.68
VRK2-201ENST00000340157 SLC22A8Q8TCC7 542 aa19.32■□□□□ 0.68
VRK2-201ENST00000340157 IPCEF1Q8WWN9 437 aaPredicted RBP19.32■□□□□ 0.68
VRK2-201ENST00000340157 TTC9Q92623 222 aa19.32■□□□□ 0.68
VRK2-201ENST00000340157 TMCO6Q96DC7 493 aa19.32■□□□□ 0.68
VRK2-201ENST00000340157 CCDC90BQ9GZT6 254 aa19.32■□□□□ 0.68
VRK2-201ENST00000340157 UBQLN3Q9H347 655 aa19.32■□□□□ 0.68
VRK2-201ENST00000340157 HHATLQ9HCP6 504 aa19.32■□□□□ 0.68
VRK2-201ENST00000340157 CLN6Q9NWW5 311 aa19.32■□□□□ 0.68
VRK2-201ENST00000340157 SH3D21A4FU49 640 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 TLX2O43763 284 aaPredicted RBP19.31■□□□□ 0.68
VRK2-201ENST00000340157 ITGA10O75578 1167 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 ADRA2AP08913 450 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 ENDOUP21128 410 aaKnown RBP19.31■□□□□ 0.68
VRK2-201ENST00000340157 ITPKBP27987 946 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 TACR3P29371 465 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 SOX3P41225 446 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 P2RX1P51575 399 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 MLLT10P55197 1068 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 EMX1Q04741 257 aaPredicted RBP19.31■□□□□ 0.68
VRK2-201ENST00000340157 EGR4Q05215 589 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 Q0VFX4 171 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 DNASE1L3Q13609 305 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 SSPNQ14714 243 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 RAB39AQ14964 217 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 NTRK2Q16620 822 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 PGGHGQ32M88 737 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 ZNF791Q3KP31 576 aaPredicted RBP19.31■□□□□ 0.68
VRK2-201ENST00000340157 FCRLBQ6BAA4 426 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 GTF2IRD2BQ6EKJ0 949 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 GTF2IRD2Q86UP8 949 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 CDK20Q8IZL9 346 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 GPR119Q8TDV5 335 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 SPACA9Q96E40 222 aaPredicted RBP19.31■□□□□ 0.68
VRK2-201ENST00000340157 PCDHGB1Q9Y5G3 927 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 CEPT1Q9Y6K0 416 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 ELOA3DA6NLF2 546 aaPredicted RBP19.31■□□□□ 0.68
VRK2-201ENST00000340157 H3BSA7 217 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 RGS10O43665 173 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 CH25HO95992 272 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 PNMTP11086 282 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 SLC15A1P46059 708 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 IL10RAQ13651 578 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 SNAPC1Q16533 368 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 OCLNQ16625 522 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 COL28A1Q2UY09 1125 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 ELOA3BQ3SY89 546 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 SYT14P1Q58G82 188 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 OR5M10Q6IEU7 315 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 BORAQ6PGQ7 559 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 SLC46A3Q7Z3Q1 461 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 LRRC17Q8N6Y2 441 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 NLGN4YQ8NFZ3 816 aaPredicted RBP19.31■□□□□ 0.68
VRK2-201ENST00000340157 ELOA3Q8NG57 546 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 OR51A7Q8NH64 312 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 B4GALNT2Q8NHY0 566 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 DOCK10Q96BY6 2186 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 CCNL2Q96S94 520 aaPredicted RBP19.31■□□□□ 0.68
VRK2-201ENST00000340157 COPS4Q9BT78 406 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 MCCC2Q9HCC0 563 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 CCNB1IP1Q9NPC3 277 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 GPR52Q9Y2T5 361 aa19.31■□□□□ 0.68
VRK2-201ENST00000340157 CNOT1A5YKK6 2376 aaKnown RBP19.3■□□□□ 0.68
VRK2-201ENST00000340157 BHLHE40O14503 412 aa19.3■□□□□ 0.68
VRK2-201ENST00000340157 SURF4O15260 269 aa19.3■□□□□ 0.68
VRK2-201ENST00000340157 FOXD2O60548 495 aaPredicted RBP19.3■□□□□ 0.68
VRK2-201ENST00000340157 C21orf33P30042 268 aaPredicted RBP19.3■□□□□ 0.68
VRK2-201ENST00000340157 MAP2K4P45985 399 aa19.3■□□□□ 0.68
VRK2-201ENST00000340157 TMED10P49755 219 aaKnown RBP19.3■□□□□ 0.68
VRK2-201ENST00000340157 RPS15P62841 145 aaKnown RBP19.3■□□□□ 0.68
VRK2-201ENST00000340157 CBFBQ13951 182 aa19.3■□□□□ 0.68
VRK2-201ENST00000340157 SLC25A30Q5SVS4 291 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms