RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 HK1P19367 917 aa16.89■□□□□ 0.29
SHKBP1-201ENST00000291842 SLC2A5P22732 501 aa16.89■□□□□ 0.29
SHKBP1-201ENST00000291842 EVX1P49640 407 aa16.89■□□□□ 0.29
SHKBP1-201ENST00000291842 ZNF85Q03923 595 aa16.89■□□□□ 0.29
SHKBP1-201ENST00000291842 RTL4Q6ZR62 310 aa16.89■□□□□ 0.29
SHKBP1-201ENST00000291842 GATSQ8NAP1 163 aa16.89■□□□□ 0.29
SHKBP1-201ENST00000291842 OR6F1Q8NGZ6 308 aa16.89■□□□□ 0.29
SHKBP1-201ENST00000291842 C16orf52Q8NHV5 167 aa16.89■□□□□ 0.29
SHKBP1-201ENST00000291842 CLIP3Q96DZ5 547 aa16.89■□□□□ 0.29
SHKBP1-201ENST00000291842 ZMYND19Q96E35 227 aaPredicted RBP16.89■□□□□ 0.29
SHKBP1-201ENST00000291842 ORAI3Q9BRQ5 295 aa16.89■□□□□ 0.29
SHKBP1-201ENST00000291842 NDC1Q9BTX1 674 aa16.89■□□□□ 0.29
SHKBP1-201ENST00000291842 TRIM2Q9C040 744 aa16.89■□□□□ 0.29
SHKBP1-201ENST00000291842 CLDN16Q9Y5I7 305 aa16.89■□□□□ 0.29
SHKBP1-201ENST00000291842 FAM25AB3EWG3 89 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 FAM25CB3EWG5 89 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 FAM25GB3EWG6 89 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 CTNSO60931 367 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 KRT8P05787 483 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 CT45A8P0DMV1 189 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 CT45A9P0DMV2 189 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 PEPDP12955 493 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 KIR2DL3P43628 341 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 BLKP51451 505 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 CT45A2Q5DJT8 189 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 ATAD3CQ5T2N8 411 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 HEATR5AQ86XA9 2040 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 FAM98AQ8NCA5 519 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 PMM1Q92871 262 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 ZNF426Q9BUY5 554 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 CCDC86Q9H6F5 360 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 TMEM165Q9HC07 324 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 NEK6Q9HC98 313 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 GPR27Q9NS67 375 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 RPS6KB2Q9UBS0 482 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 ADAM18Q9Y3Q7 739 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 MAU2Q9Y6X3 613 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 A0A1B0GVC2 190 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 A6NIN4 97 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 IMPA2O14732 288 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 MT-ND5P03915 603 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 HIST1H1CP16403 213 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 GFERP55789 205 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 OR10A3P58181 314 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 GRAMD2AQ8IUY3 354 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 OR13C5Q8NGS8 318 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 OR5J2Q8NH18 312 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 CHAC2Q8WUX2 184 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 CAPSLQ8WWF8 208 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 DMRTB1Q96MA1 342 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 Q9N2J8 555 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 ZNF221Q9UK13 617 aa16.88■□□□□ 0.29
SHKBP1-201ENST00000291842 TTC36A6NLP5 189 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 MCIDASD6RGH6 385 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 WNT1P04628 370 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 PYCR1P32322 319 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 RCVRNP35243 200 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 BDH1Q02338 343 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 FGFBP1Q14512 234 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 TRIQKQ629K1 86 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 FAAH2Q6GMR7 532 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 LMX1AQ8TE12 382 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 EFHD2Q96C19 240 aaPredicted RBP16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 TGM7Q96PF1 710 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 KCNN2Q9H2S1 579 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 SOHLH2Q9NX45 425 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 MRPS33Q9Y291 106 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 IER3IP1Q9Y5U9 82 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 B4DXG7 233 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 CSTAP01040 98 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 IGLV3-19P01714 112 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 ELK1P19419 428 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 SLC6A6P31641 620 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 GPR3P46089 330 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 SF3B4Q15427 424 aaKnown RBP eCLIP16.87■□□□□ 0.291e-6■■■■■ 60
SHKBP1-201ENST00000291842 LCN1P1Q5VSP4 162 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 ULK3Q6PHR2 472 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 BCORP1Q8N888 145 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 LSMEM1Q8N8F7 131 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 C19orf18Q8NEA5 215 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 KIAA1143Q96AT1 154 aaPredicted RBP16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 SOSTQ9BQB4 213 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 OR10A5Q9H207 317 aa16.87■□□□□ 0.29
SHKBP1-201ENST00000291842 A0A1W2PPK0 400 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 CLDN4O14493 209 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 PROS1P07225 676 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 NAA10P41227 235 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 ATP12AP54707 1039 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 TP53I3Q53FA7 332 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 MZT2AQ6P582 158 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 VASH1Q7L8A9 365 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 CEACAM19Q7Z692 300 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 DEPDC7Q96QD5 511 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 SLC38A3Q99624 504 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 SPRTNQ9H040 489 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 ERVMER34-1Q9H9K5 563 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 DDX28Q9NUL7 540 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 SDK1Q7Z5N4 2213 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 THADAQ6YHU6 1953 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms