RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 AMBRA1Q9C0C7 1298 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 LDAHQ9H6V9 325 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 TMEM27Q9HBJ8 222 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 IL1RAPQ9NPH3 570 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 OSGIN1Q9UJX0 560 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 RPH3AQ9Y2J0 694 aaPredicted RBP12.74□□□□□ -0.37
VPS25-201ENST00000253794 ZNF835Q9Y2P0 537 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 ZNF337Q9Y3M9 751 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 ENPP4Q9Y6X5 453 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 A0A1B0GTH9 108 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 TRAPPC13A5PLN9 417 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 SHISA8B8ZZ34 492 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 BCKDKO14874 412 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 ZNF208O43345 1280 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 THY1P04216 161 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 PNMTP11086 282 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 PEPDP12955 493 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 ZNF708P17019 499 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 TACR3P29371 465 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 CLK1P49759 484 aaKnown RBP12.73□□□□□ -0.37
VPS25-201ENST00000253794 CLDN18P56856 261 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 VLDLRP98155 873 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 MERTKQ12866 999 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 C3orf33Q6P1S2 294 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 LINC00114Q6XXX2 140 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 Q6ZPB1 254 aaPredicted RBP12.73□□□□□ -0.37
VPS25-201ENST00000253794 ADGRG5Q8IZF4 528 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 ADAMTS16Q8TE57 1224 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 SLC25A43Q8WUT9 341 aaPredicted RBP12.73□□□□□ -0.37
VPS25-201ENST00000253794 ABTB1Q969K4 478 aaPredicted RBP12.73□□□□□ -0.37
VPS25-201ENST00000253794 SLC47A1Q96FL8 570 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 DUS3LQ96G46 650 aaKnown RBP12.73□□□□□ -0.37
VPS25-201ENST00000253794 PRRC1Q96M27 445 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 RAB3IPQ96QF0 476 aaPredicted RBP12.73□□□□□ -0.37
VPS25-201ENST00000253794 TIMP4Q99727 224 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 ZNF426Q9BUY5 554 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 CTPS2Q9NRF8 586 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 NDUFAF4Q9P032 175 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 STOML1Q9UBI4 398 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 CHRNA9Q9UGM1 479 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 A4GNTQ9UNA3 340 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 SLC6A5Q9Y345 797 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 SPIN1Q9Y657 262 aaPredicted RBP12.73□□□□□ -0.37
VPS25-201ENST00000253794 ZNF462Q96JM2 2506 aa12.73□□□□□ -0.37
VPS25-201ENST00000253794 ZNF407Q9C0G0 2248 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 A0A087WUJ7 227 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 DHRS12A0PJE2 317 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 CHP2O43745 196 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 FZD7O75084 574 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 NPIPB7O75200 414 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 CIB2O75838 187 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 NQO1P15559 274 aaKnown RBP12.72□□□□□ -0.37
VPS25-201ENST00000253794 ITGA2P17301 1181 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 RHCEP18577 417 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 IL11P20809 199 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 HSF1Q00613 529 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.72□□□□□ -0.37
VPS25-201ENST00000253794 DCST1Q5T197 706 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 C1orf146Q5VVC0 180 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 DEF8Q6ZN54 512 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 ZNF605Q86T29 641 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 GGNQ86UU5 652 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 OFCC1Q8IZS5 231 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 CADM2Q8N3J6 435 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 GALNT11Q8NCW6 608 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 PAPD5Q8NDF8 572 aaKnown RBP12.72□□□□□ -0.37
VPS25-201ENST00000253794 OR5M1Q8NGP8 315 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 WDYHV1Q96HA8 205 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 MPP4Q96JB8 637 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 ADGRG7Q96K78 797 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 DHRS1Q96LJ7 313 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 ZNF300Q96RE9 604 aaPredicted RBP12.72□□□□□ -0.37
VPS25-201ENST00000253794 PRR14Q9BWN1 585 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 ANKRD19PQ9H560 264 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 SERINC1Q9NRX5 453 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 RPS6KB2Q9UBS0 482 aa12.72□□□□□ -0.37
VPS25-201ENST00000253794 POLEQ07864 2286 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 TMED7-TICAM2A0A0A6YYA0 188 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 GJE1A6NN92 205 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 FFAR1O14842 300 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 ADAMDEC1O15204 470 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 IGF2P01344 180 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 FABP3P05413 133 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 RAP2AP10114 183 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 POU3F2P20265 443 aaPredicted RBP12.71□□□□□ -0.37
VPS25-201ENST00000253794 PTGS2P35354 604 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 CDH12P55289 794 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 CLDN15P56746 228 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 ACTR3P61158 418 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 TLE1Q04724 770 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 CCNIQ14094 377 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 CTU2Q2VPK5 515 aaKnown RBP12.71□□□□□ -0.37
VPS25-201ENST00000253794 FAM98BQ52LJ0 330 aaKnown RBP12.71□□□□□ -0.37
VPS25-201ENST00000253794 ALG10BQ5I7T1 473 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 EMC4Q5J8M3 183 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 C5orf46Q6UWT4 87 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 GFRALQ6UXV0 394 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 ESPNLQ6ZVH7 1005 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 ADGRE4PQ86SQ3 457 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 PM20D2Q8IYS1 436 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 233.2 ms