RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Fam69aQ9D6I7 428 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Hsd17b11Q9EQ06 298 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Adam34A2RSG8 714 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Olfr59B1ARL3 323 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Mrap2D3Z1Q2 207 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Tgoln1Q62313 353 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Slc30a6Q8BJM5 460 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Eif1axQ8BMJ3 144 aaKnown RBP14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Fastkd3Q8BSN9 661 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Gtf2f2Q8R0A0 249 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Ntng1Q8R4G0 539 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Zfand2bQ91X58 257 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Scgb3a1Q920D7 104 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Mcoln1Q99J21 580 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Prss16Q9QXE5 509 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Asic5Q9R0Y1 495 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cdh20Q9Z0M3 801 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Gm5493S4R2D1 92 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cd163l1A0A1B0GSB0 991 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 A0A1W2P799 418 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Coq10aE9Q3H6 259 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Gm3327F7C9A1 213 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cyr61P18406 379 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Apoc2Q05020 97 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cox15Q8BJ03 413 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Lypd4Q8BVP6 246 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Tceal5Q8CCT4 200 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Unc5dQ8K1S2 956 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Q9DAD0 168 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Yipf5Q9EQQ2 257 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Chst13D3Z6E3 336 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Gm21560D3Z7A4 205 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Vmn2r99H3BK37 856 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Rnf13O54965 381 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Foxq1O70220 400 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Ube2j2Q6P073 259 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Gpr68Q8BFQ3 365 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Q8BHR8 331 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Gpr18Q8K1Z6 331 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Ntmt1Q8R2U4 223 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Swsap1Q8VCI7 278 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Ak6Q8VCP8 172 aa14.58□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Gm29797A0A140LIA7 188 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Olfr209L7N1X3 305 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cldn4O35054 210 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cnih2O35089 160 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 C9P06683 548 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Csf1P07141 552 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 HnrnpkP61979 463 aaKnown RBP14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Malt1Q2TBA3 832 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Tmem231Q3U284 315 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Trim23Q8BGX0 574 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Nfatc4Q8K120 901 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Tmem268Q8R239 342 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Qrsl1Q9CZN8 525 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cers4Q9D6J1 393 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Nek7Q9ES74 302 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Tmem8aQ9ESN3 769 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Dnajb8Q9QYI7 227 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Hey1Q9WV93 299 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Eif2s3xQ9Z0N1 472 aaKnown RBP14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Eif2s3yQ9Z0N2 472 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Gm13271B1AYH9 182 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Olfr1511E9PWU0 318 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Olfr1510E9PZZ6 318 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Wnt4P22724 351 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 TpoP35419 914 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Tra2bP62996 288 aaKnown RBP14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cldn34b3Q80ZS5 209 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 AgmoQ8BS35 447 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cnot2Q8C5L3 540 aaKnown RBP14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Chmp1aQ921W0 196 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Steap1Q9CWR7 339 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Pard6gQ9JK84 382 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 ItgaxQ9QXH4 1169 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Baz2bA2AUY4 2123 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Atxn7l3A2AWT3 347 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Xpnpep2B1AVD1 674 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Zfp989H3BLB0 661 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Gm2035J3QP87 144 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cdk1P11440 297 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cd63P41731 238 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 SobpQ0P5V2 864 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Eid2Q6X7S9 236 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 NrrosQ8BMT4 693 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Peli2Q8BST6 419 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Lrrn3Q8CBC6 707 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Snapc5Q8R2K7 98 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Frs3Q91WJ0 492 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 LhppQ9D7I5 270 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Tas2r103Q9JKA3 312 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 HgfacQ9R098 653 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Stub1Q9WUD1 304 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Vmn2r105E9Q3A5 860 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Zfp169E9Q3R6 731 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 mt-Co3P00416 261 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cd80Q00609 306 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Chst9Q76EC5 413 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Olfr672Q8VG28 312 aa14.57□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cdc20Q9JJ66 499 aa14.57□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 38.4 ms