RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 C14orf105Q9NVL8 296 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 NLGN3Q9NZ94 848 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 FOXD3Q9UJU5 478 aaPredicted RBP11.22□□□□□ -0.61
SRRT-216ENST00000618262 KMT2EQ8IZD2 1858 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 A0A1W2PRB8 838 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 FAM74A7A6NL05 159 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 LMO7DNF2Z398 122 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 SLC28A1O00337 649 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 SAP18O00422 153 aaKnown RBP11.22□□□□□ -0.61
SRRT-216ENST00000618262 ERN1O75460 977 aaKnown RBP11.22□□□□□ -0.61
SRRT-216ENST00000618262 RPP14O95059 124 aaKnown RBP11.22□□□□□ -0.61
SRRT-216ENST00000618262 GABARAPO95166 117 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 ELK4P28324 431 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 AQP5P55064 265 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 TNFRSF9Q07011 255 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 FAM74A3Q4VXF1 159 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 BEX5Q5H9J7 111 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 RNLSQ5VYX0 342 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 ASCL5Q7RTU5 278 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 SPAG16Q8N0X2 631 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 MAPK15Q8TD08 544 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 OIT3Q8WWZ8 545 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 NEIL2Q969S2 332 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 PACRGQ96M98 296 aaPredicted RBP11.22□□□□□ -0.61
SRRT-216ENST00000618262 TGM7Q96PF1 710 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 KCNS3Q9BQ31 491 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 TRMOQ9BU70 441 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 MED17Q9NVC6 651 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 PAK1IP1Q9NWT1 392 aaPredicted RBP11.22□□□□□ -0.61
SRRT-216ENST00000618262 OPTCQ9UBM4 332 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 A0A1W2PPQ1 181 aa11.21□□□□□ -0.61
SRRT-216ENST00000618262 NUDT21O43809 227 aaKnown RBP11.21□□□□□ -0.61
SRRT-216ENST00000618262 STK16O75716 305 aa11.21□□□□□ -0.61
SRRT-216ENST00000618262 MED26O95402 600 aa11.21□□□□□ -0.61
SRRT-216ENST00000618262 RAF1P04049 648 aa11.21□□□□□ -0.61
SRRT-216ENST00000618262 C8GP07360 202 aa11.21□□□□□ -0.61
SRRT-216ENST00000618262 HOXC4P09017 264 aaPredicted RBP11.21□□□□□ -0.61
SRRT-216ENST00000618262 MSX2P35548 267 aaPredicted RBP11.21□□□□□ -0.61
SRRT-216ENST00000618262 RFC3P40938 356 aa11.21□□□□□ -0.61
SRRT-216ENST00000618262 PNLIPRP1P54315 467 aa11.21□□□□□ -0.61
SRRT-216ENST00000618262 SH3BP2P78314 561 aa11.21□□□□□ -0.61
SRRT-216ENST00000618262 PNLIPRP3Q17RR3 467 aa11.21□□□□□ -0.61
SRRT-216ENST00000618262 ZNF678Q5SXM1 525 aa11.21□□□□□ -0.61
SRRT-216ENST00000618262 LIPMQ5VYY2 423 aa11.21□□□□□ -0.61
SRRT-216ENST00000618262 SPNS3Q6ZMD2 512 aa11.21□□□□□ -0.61
SRRT-216ENST00000618262 PGAP1Q75T13 922 aa11.21□□□□□ -0.61
SRRT-216ENST00000618262 PRSS48Q7RTY5 328 aa11.21□□□□□ -0.61
SRRT-216ENST00000618262 SLC46A3Q7Z3Q1 461 aa11.21□□□□□ -0.61
SRRT-216ENST00000618262 GOLGA7Q7Z5G4 137 aa11.21□□□□□ -0.61
SRRT-216ENST00000618262 DCUN1D3Q8IWE4 304 aa11.21□□□□□ -0.61
SRRT-216ENST00000618262 PACRGLQ8N7B6 248 aa11.21□□□□□ -0.61
SRRT-216ENST00000618262 SETD6Q8TBK2 473 aa11.21□□□□□ -0.61
SRRT-216ENST00000618262 ZDHHC2Q9UIJ5 367 aa11.21□□□□□ -0.61
SRRT-216ENST00000618262 PCDH15Q96QU1 1955 aa11.21□□□□□ -0.61
SRRT-216ENST00000618262 E9PI62 339 aa11.21□□□□□ -0.62
SRRT-216ENST00000618262 GMFGO60234 142 aa11.21□□□□□ -0.62
SRRT-216ENST00000618262 HPGDSO60760 199 aa11.21□□□□□ -0.62
SRRT-216ENST00000618262 PRAMEF4O60810 478 aa11.21□□□□□ -0.62
SRRT-216ENST00000618262 OR4F21O95013 312 aa11.21□□□□□ -0.62
SRRT-216ENST00000618262 PNPP00491 289 aa11.21□□□□□ -0.62
SRRT-216ENST00000618262 IFNA6P05013 189 aa11.21□□□□□ -0.62
SRRT-216ENST00000618262 PTPN6P29350 595 aa11.21□□□□□ -0.62
SRRT-216ENST00000618262 GGT5P36269 586 aa11.21□□□□□ -0.62
SRRT-216ENST00000618262 MECP2P51608 486 aaKnown RBP11.21□□□□□ -0.62
SRRT-216ENST00000618262 SELENOVP59797 346 aa11.21□□□□□ -0.62
SRRT-216ENST00000618262 RASGEF1BQ0VAM2 473 aa11.21□□□□□ -0.62
SRRT-216ENST00000618262 ILKQ13418 452 aa11.21□□□□□ -0.62
SRRT-216ENST00000618262 PRAMEF9Q5VWM5 478 aa11.21□□□□□ -0.62
SRRT-216ENST00000618262 SLC23A3Q6PIS1 610 aa11.21□□□□□ -0.62
SRRT-216ENST00000618262 NDUFAF7Q7L592 441 aa11.21□□□□□ -0.62
SRRT-216ENST00000618262 CATSPERDQ86XM0 798 aa11.21□□□□□ -0.62
SRRT-216ENST00000618262 GID4Q8IVV7 300 aa11.21□□□□□ -0.62
SRRT-216ENST00000618262 ENTHD1Q8IYW4 607 aa11.21□□□□□ -0.62
SRRT-216ENST00000618262 RNF113BQ8IZP6 322 aaKnown RBP11.21□□□□□ -0.62
SRRT-216ENST00000618262 STOML3Q8TAV4 291 aa11.21□□□□□ -0.62
SRRT-216ENST00000618262 PCNPQ8WW12 178 aaKnown RBP11.21□□□□□ -0.62
SRRT-216ENST00000618262 EBF4Q9BQW3 602 aa11.21□□□□□ -0.62
SRRT-216ENST00000618262 SLIRPQ9GZT3 109 aaKnown RBP11.21□□□□□ -0.62
SRRT-216ENST00000618262 STARD5Q9NSY2 213 aa11.21□□□□□ -0.62
SRRT-216ENST00000618262 A0A0G2JN53 185 aa11.2□□□□□ -0.62
SRRT-216ENST00000618262 TUBAL3A6NHL2 446 aa11.2□□□□□ -0.62
SRRT-216ENST00000618262 CDX4O14627 284 aaPredicted RBP11.2□□□□□ -0.62
SRRT-216ENST00000618262 CTSBP07858 339 aa11.2□□□□□ -0.62
SRRT-216ENST00000618262 ERCC1P07992 297 aaPredicted RBP11.2□□□□□ -0.62
SRRT-216ENST00000618262 TP53BP2Q13625 1128 aa11.2□□□□□ -0.62
SRRT-216ENST00000618262 GTF2H2Q13888 395 aa11.2□□□□□ -0.62
SRRT-216ENST00000618262 COL28A1Q2UY09 1125 aa11.2□□□□□ -0.62
SRRT-216ENST00000618262 MTX3Q5HYI7 312 aa11.2□□□□□ -0.62
SRRT-216ENST00000618262 GTF2H2CQ6P1K8 395 aa11.2□□□□□ -0.62
SRRT-216ENST00000618262 DLEU7Q6UYE1 221 aa11.2□□□□□ -0.62
SRRT-216ENST00000618262 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.2□□□□□ -0.62
SRRT-216ENST00000618262 NEK7Q8TDX7 302 aa11.2□□□□□ -0.62
SRRT-216ENST00000618262 UBASH3BQ8TF42 649 aa11.2□□□□□ -0.62
SRRT-216ENST00000618262 RNF145Q96MT1 663 aa11.2□□□□□ -0.62
SRRT-216ENST00000618262 NEDD4LQ96PU5 975 aa11.2□□□□□ -0.62
SRRT-216ENST00000618262 MTERF1Q99551 399 aaKnown RBP11.2□□□□□ -0.62
SRRT-216ENST00000618262 ACTR8Q9H981 624 aa11.2□□□□□ -0.62
SRRT-216ENST00000618262 BRF2Q9HAW0 419 aa11.2□□□□□ -0.62
SRRT-216ENST00000618262 ABCB9Q9NP78 766 aa11.2□□□□□ -0.62
SRRT-216ENST00000618262 SEC14L4Q9UDX3 406 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms