RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 CD5LO43866 347 aa15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 PEX11AO75192 247 aa15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 GGT1P19440 569 aa15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 PGCP20142 388 aa15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 CLK1P49759 484 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 BSPH1Q075Z2 132 aa15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 AP1ARQ63HQ0 302 aa15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 DNM1P46Q6ZS02 220 aa15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 TMPPEQ6ZT21 453 aa15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 EIF3MQ7L2H7 374 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 ZNF100Q8IYN0 542 aa15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 C4orf33Q8N1A6 199 aa15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 FNDC5Q8NAU1 212 aa15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 ATP6V1C2Q8NEY4 427 aa15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 ZHX1-C8orf76Q96EF9 292 aa15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 OTUB1Q96FW1 271 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 APOPT1Q96IL0 206 aa15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 ADAD1Q96M93 576 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 OR7D2Q96RA2 312 aa15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 TRAF4Q9BUZ4 470 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 DUSP26Q9BV47 211 aa15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 C12orf65Q9H3J6 166 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 EXD2Q9NVH0 621 aa15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 PRDM4Q9UKN5 801 aa15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 PCDHGB4Q9UN71 923 aa15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 MAGED1Q9Y5V3 778 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 ABCA1O95477 2261 aa15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 GPR171O14626 319 aa15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 DNPH1O43598 174 aa15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 C6orf47O95873 294 aa15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 COX5AP20674 150 aa15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 EFNA1P20827 205 aaPredicted RBP15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 MATN1P21941 496 aa15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 ALDH3A1P30838 453 aa15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 APOBEC1P41238 236 aaKnown RBP15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 TOMM34Q15785 309 aaPredicted RBP15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 PGGHGQ32M88 737 aa15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 TIGD2Q4W5G0 525 aa15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 IL23RQ5VWK5 629 aa15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 KLHL17Q6TDP4 642 aa15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 TMEM108Q6UXF1 575 aa15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 MTDHQ86UE4 582 aaKnown RBP15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 HIPK1Q86Z02 1210 aa15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 RIMKLAQ8IXN7 391 aa15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 DEPDC4Q8N2C3 294 aa15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 TMCO5AQ8N6Q1 288 aa15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 ZNF614Q8N883 585 aa15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 OR5B2Q96R09 309 aa15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 KLHDC3Q9BQ90 382 aa15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 RHNO1Q9BSD3 238 aa15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 POLE3Q9NRF9 147 aa15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 ACER3Q9NUN7 267 aa15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 ING1Q9UK53 422 aaPredicted RBP15.77■□□□□ 0.12
SHKBP1-227ENST00000602011 CADP27708 2225 aa15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 IGKV3D-15A0A087WSY6 115 aa15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 OR5H1A6NKK0 313 aa15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 SMIM23A6NLE4 172 aa15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 ESPNB1AK53 854 aa15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 SULT2B1O00204 365 aa15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 OIP5O43482 229 aa15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 SLU7O95391 586 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 CHRNGP07510 517 aa15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 BMP4P12644 408 aa15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 PTAFRP25105 342 aa15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 CLDN8P56748 225 aa15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 PTGR1Q14914 329 aa15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 TSC22D1Q15714 1073 aa15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 ARHGAP11BQ3KRB8 267 aa15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 FBXW9Q5XUX1 488 aa15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 OR7E24Q6IFN5 339 aa15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 C6orf120Q7Z4R8 191 aa15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 VPS37AQ8NEZ2 397 aa15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 RFWD2Q8NHY2 731 aa15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 THUMPD3Q9BV44 507 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 ANKZF1Q9H8Y5 726 aa15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 ASIC5Q9NY37 505 aa15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 SLC35A3Q9Y2D2 325 aa15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 HDGFL3Q9Y3E1 203 aa15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 KCNE3Q9Y6H6 103 aa15.76■□□□□ 0.11
SHKBP1-227ENST00000602011 A0A1W2PNR3 127 aa15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 RNF212BA8MTL3 300 aa15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 SMAD9O15198 467 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 LYZL6O75951 148 aa15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 CSTAP01040 98 aa15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 IGHV4-39P01824 125 aa15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 NUDT17P0C025 328 aa15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 ACVR1BP36896 505 aa15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 CDKN1AP38936 164 aa15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 DIO1P49895 249 aa15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 CCR4P51679 360 aa15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 MAP2K6P52564 334 aa15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 SESN3P58005 492 aa15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 HBA1P69905 142 aa15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 EMX2Q04743 252 aa15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 SKP2Q13309 424 aa15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 STK11Q15831 433 aa15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 SYT14P1Q58G82 188 aa15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 PDZK1Q5T2W1 519 aa15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 ATAD3BQ5T9A4 648 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms