RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 CGAP01215 116 aa12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 HNRNPCL4P0DMR1 293 aa12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 BMP2P12643 396 aa12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 NID1P14543 1247 aa12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 IL7RP16871 459 aa12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 SFTPDP35247 375 aa12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 SLC6A8P48029 635 aa12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 PCYT1AP49585 367 aa12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 SORDQ00796 357 aa12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 SELENBP1Q13228 472 aa12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 SNTB1Q13884 538 aaKnown RBP12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 GNA13Q14344 377 aa12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 TMEM176BQ3YBM2 270 aaPredicted RBP12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 HSP90B2PQ58FF3 399 aa12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 VWA1Q6PCB0 445 aa12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 FAM214BQ7L5A3 538 aa12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 BTLAQ7Z6A9 289 aa12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 CNEP1R1Q8N9A8 125 aa12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 CNOT9Q92600 299 aaKnown RBP12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 LURAP1Q96LR2 239 aa12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 ZNF559Q9BR84 538 aa12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 RBM24Q9BX46 236 aaKnown RBP12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 RAD21L1Q9H4I0 556 aa12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 MED4Q9NPJ6 270 aa12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 TIGARQ9NQ88 270 aa12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 PRDM4Q9UKN5 801 aa12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 MCTS1Q9ULC4 181 aaKnown RBP12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 CREBBPQ92793 2442 aa12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 DOCK7Q96N67 2140 aa12.07□□□□□ -0.48
ARHGEF1-222ENST00000600517 TRBV5-3A0A0A0MS03 114 aa12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 A0A0G2JND7 137 aa12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 ATP8B1O43520 1251 aa12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 BCHEP06276 602 aa12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 NUDT7P0C024 238 aa12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 PABPC4LP0CB38 370 aaKnown RBP12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 CD8BP10966 210 aa12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 RYKP34925 604 aa12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 CRISP3P54108 245 aa12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 KRTAP10-9P60411 292 aa12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 MERTKQ12866 999 aa12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 FADDQ13158 208 aa12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 MYBPHQ13203 477 aa12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 PLEKHM3Q6ZWE6 761 aa12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 LUZP2Q86TE4 346 aa12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 PEX5LQ8IYB4 626 aa12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 ATP6V1C2Q8NEY4 427 aa12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 OR52P1PQ8NH57 321 aa12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 FAM222BQ8WU58 562 aa12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 WDR60Q8WVS4 1066 aa12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 GMPPAQ96IJ6 420 aaPredicted RBP12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 BCL2L10Q9HD36 194 aa12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 A4GALTQ9NPC4 353 aa12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 GLRX2Q9NS18 164 aa12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 DNAJB12Q9NXW2 375 aaKnown RBP12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 CRIM1Q9NZV1 1036 aa12.06□□□□□ -0.48
ARHGEF1-222ENST00000600517 TMEM247A6NEH6 219 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 TUBAL3A6NHL2 446 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 FAAHO00519 579 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 ADAM11O75078 769 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 SS18L1O75177 396 aaPredicted RBP12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 SMNDC1O75940 238 aaKnown RBP eCLIP12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 PPIBP23284 216 aaKnown RBP12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 APOBEC1P41238 236 aaKnown RBP12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 CPA2P48052 419 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 RAC3P60763 192 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 SIRPAP78324 504 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 DAZAP2Q15038 168 aaPredicted RBP12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 ZSWIM7Q19AV6 140 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 MRPL2Q5T653 305 aaKnown RBP12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 PRAMEF8Q5VWM4 474 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 PRAMEF7Q5VXH5 474 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 GTF2IRD2BQ6EKJ0 949 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 PPP4R4Q6NUP7 873 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 ZNF474Q6S9Z5 364 aaPredicted RBP12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 DLEU7Q6UYE1 221 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 GRINAQ7Z429 371 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 GTF2IRD2Q86UP8 949 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 ZZZ3Q8IYH5 903 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 ZNF563Q8TA94 476 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 TSPEARQ8WU66 669 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 CPNE4Q96A23 557 aaPredicted RBP12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 TMEM19Q96HH6 336 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 CCDC106Q9BWC9 280 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 TMEM120AQ9BXJ8 343 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 CCDC134Q9H6E4 229 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 COQ10BQ9H8M1 238 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 PLSCR4Q9NRQ2 329 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 SERINC1Q9NRX5 453 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 GALNT8Q9NY28 637 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 VAPAQ9P0L0 249 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 ZNF232Q9UNY5 417 aa12.05□□□□□ -0.48
ARHGEF1-222ENST00000600517 UQCRHLA0A096LP55 91 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 FAM221AA4D161 298 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 CDHR4A6H8M9 788 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 CFAP73A6NFT4 308 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 AP3D1O14617 1153 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 PLGP00747 810 aaPredicted RBP12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 THBS1P07996 1170 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 TROVE2P10155 538 aaKnown RBP eCLIP12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 EPXP11678 715 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms