RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 SH3D21A4FU49 640 aa20.22■□□□□ 0.83
CCDC9-204ENST00000599398 CLDN24A6NM45 220 aa20.22■□□□□ 0.83
CCDC9-204ENST00000599398 BCAS1O75363 584 aaPredicted RBP20.22■□□□□ 0.83
CCDC9-204ENST00000599398 SASH3O75995 380 aa20.22■□□□□ 0.83
CCDC9-204ENST00000599398 CGAP01215 116 aa20.22■□□□□ 0.83
CCDC9-204ENST00000599398 ZCCHC18P0CG32 403 aa20.22■□□□□ 0.83
CCDC9-204ENST00000599398 CD8BP10966 210 aa20.22■□□□□ 0.83
CCDC9-204ENST00000599398 POU2F1P14859 743 aa20.22■□□□□ 0.83
CCDC9-204ENST00000599398 CD79BP40259 229 aa20.22■□□□□ 0.83
CCDC9-204ENST00000599398 MERTKQ12866 999 aa20.22■□□□□ 0.83
CCDC9-204ENST00000599398 DAZAP2Q15038 168 aaPredicted RBP20.22■□□□□ 0.83
CCDC9-204ENST00000599398 ZNF239Q16600 458 aaKnown RBP20.22■□□□□ 0.83
CCDC9-204ENST00000599398 AP1ARQ63HQ0 302 aa20.22■□□□□ 0.83
CCDC9-204ENST00000599398 GTF2IRD2BQ6EKJ0 949 aa20.22■□□□□ 0.83
CCDC9-204ENST00000599398 C3orf33Q6P1S2 294 aa20.22■□□□□ 0.83
CCDC9-204ENST00000599398 SLC2A7Q6PXP3 512 aa20.22■□□□□ 0.83
CCDC9-204ENST00000599398 GTF2IRD2Q86UP8 949 aa20.22■□□□□ 0.83
CCDC9-204ENST00000599398 ARFGAP2Q8N6H7 521 aa20.22■□□□□ 0.83
CCDC9-204ENST00000599398 ZNF610Q8N9Z0 462 aa20.22■□□□□ 0.83
CCDC9-204ENST00000599398 FAM71CQ8NEG0 241 aa20.22■□□□□ 0.83
CCDC9-204ENST00000599398 NRGNQ92686 78 aa20.22■□□□□ 0.83
CCDC9-204ENST00000599398 CPNE4Q96A23 557 aaPredicted RBP20.22■□□□□ 0.83
CCDC9-204ENST00000599398 MAGEB18Q96M61 343 aa20.22■□□□□ 0.83
CCDC9-204ENST00000599398 SRXN1Q9BYN0 137 aa20.22■□□□□ 0.83
CCDC9-204ENST00000599398 GLRX2Q9NS18 164 aa20.22■□□□□ 0.83
CCDC9-204ENST00000599398 P2RX2Q9UBL9 471 aa20.22■□□□□ 0.83
CCDC9-204ENST00000599398 NDRG3Q9UGV2 375 aa20.22■□□□□ 0.83
CCDC9-204ENST00000599398 A0A1W2PNR3 127 aa20.21■□□□□ 0.83
CCDC9-204ENST00000599398 AGAP5A6NIR3 686 aa20.21■□□□□ 0.83
CCDC9-204ENST00000599398 ETV2O00321 342 aaPredicted RBP20.21■□□□□ 0.83
CCDC9-204ENST00000599398 DNAJA2O60884 412 aa20.21■□□□□ 0.83
CCDC9-204ENST00000599398 SS18L1O75177 396 aaPredicted RBP20.21■□□□□ 0.83
CCDC9-204ENST00000599398 PABPC4LP0CB38 370 aaKnown RBP20.21■□□□□ 0.83
CCDC9-204ENST00000599398 ETFAP13804 333 aa20.21■□□□□ 0.83
CCDC9-204ENST00000599398 EXOC3L2Q2M3D2 409 aa20.21■□□□□ 0.83
CCDC9-204ENST00000599398 OR6K3Q8NGY3 331 aa20.21■□□□□ 0.83
CCDC9-204ENST00000599398 THOC1Q96FV9 657 aaKnown RBP20.21■□□□□ 0.83
CCDC9-204ENST00000599398 DACH2Q96NX9 599 aa20.21■□□□□ 0.83
CCDC9-204ENST00000599398 COQ10BQ9H8M1 238 aa20.21■□□□□ 0.83
CCDC9-204ENST00000599398 MTHFD2LQ9H903 347 aaPredicted RBP20.21■□□□□ 0.83
CCDC9-204ENST00000599398 SERINC1Q9NRX5 453 aa20.21■□□□□ 0.83
CCDC9-204ENST00000599398 ACER3Q9NUN7 267 aa20.21■□□□□ 0.83
CCDC9-204ENST00000599398 CCDC167Q9P0B6 97 aa20.21■□□□□ 0.83
CCDC9-204ENST00000599398 NR5A2O00482 541 aa20.2■□□□□ 0.82
CCDC9-204ENST00000599398 CASKO14936 926 aa20.2■□□□□ 0.82
CCDC9-204ENST00000599398 IL7RP16871 459 aa20.2■□□□□ 0.82
CCDC9-204ENST00000599398 MAGEA8P43361 318 aa20.2■□□□□ 0.82
CCDC9-204ENST00000599398 MRPL19P49406 292 aaKnown RBP20.2■□□□□ 0.82
CCDC9-204ENST00000599398 MVDP53602 400 aa20.2■□□□□ 0.82
CCDC9-204ENST00000599398 DSTNP60981 165 aa20.2■□□□□ 0.82
CCDC9-204ENST00000599398 GNA13Q14344 377 aa20.2■□□□□ 0.82
CCDC9-204ENST00000599398 PLEKHM3Q6ZWE6 761 aa20.2■□□□□ 0.82
CCDC9-204ENST00000599398 WDR60Q8WVS4 1066 aa20.2■□□□□ 0.82
CCDC9-204ENST00000599398 CNOT9Q92600 299 aaKnown RBP20.2■□□□□ 0.82
CCDC9-204ENST00000599398 GTF2H4Q92759 462 aa20.2■□□□□ 0.82
CCDC9-204ENST00000599398 OR5B2Q96R09 309 aa20.2■□□□□ 0.82
CCDC9-204ENST00000599398 EXOSC3Q9NQT5 275 aaKnown RBP20.2■□□□□ 0.82
CCDC9-204ENST00000599398 ELOVL5Q9NYP7 299 aa20.2■□□□□ 0.82
CCDC9-204ENST00000599398 PCDHB14Q9Y5E9 798 aa20.2■□□□□ 0.82
CCDC9-204ENST00000599398 AKAP9Q99996 3911 aa20.2■□□□□ 0.82
CCDC9-204ENST00000599398 FAM221AA4D161 298 aa20.19■□□□□ 0.82
CCDC9-204ENST00000599398 BCHEP06276 602 aa20.19■□□□□ 0.82
CCDC9-204ENST00000599398 FCRLAQ7L513 359 aa20.19■□□□□ 0.82
CCDC9-204ENST00000599398 CMIPQ8IY22 773 aa20.19■□□□□ 0.82
CCDC9-204ENST00000599398 PEX5LQ8IYB4 626 aa20.19■□□□□ 0.82
CCDC9-204ENST00000599398 RNF128Q8TEB7 428 aa20.19■□□□□ 0.82
CCDC9-204ENST00000599398 ABHD3Q8WU67 409 aa20.19■□□□□ 0.82
CCDC9-204ENST00000599398 PAIP1Q9H074 479 aaKnown RBP20.19■□□□□ 0.82
CCDC9-204ENST00000599398 C12orf49Q9H741 205 aa20.19■□□□□ 0.82
CCDC9-204ENST00000599398 PLSCR4Q9NRQ2 329 aa20.19■□□□□ 0.82
CCDC9-204ENST00000599398 CALML5Q9NZT1 146 aa20.19■□□□□ 0.82
CCDC9-204ENST00000599398 HRNRQ86YZ3 2850 aaPredicted RBP20.19■□□□□ 0.82
CCDC9-204ENST00000599398 TMEM247A6NEH6 219 aa20.18■□□□□ 0.82
CCDC9-204ENST00000599398 DBIP07108 87 aaKnown RBP20.18■□□□□ 0.82
CCDC9-204ENST00000599398 UGT2B10P36537 528 aa20.18■□□□□ 0.82
CCDC9-204ENST00000599398 CRISP3P54108 245 aa20.18■□□□□ 0.82
CCDC9-204ENST00000599398 RNPS1Q15287 305 aaKnown RBP20.18■□□□□ 0.82
CCDC9-204ENST00000599398 TMEM201Q5SNT2 666 aa20.18■□□□□ 0.82
CCDC9-204ENST00000599398 BLOC1S3Q6QNY0 202 aa20.18■□□□□ 0.82
CCDC9-204ENST00000599398 CDC20BQ86Y33 519 aa20.18■□□□□ 0.82
CCDC9-204ENST00000599398 FUNDC1Q8IVP5 155 aa20.18■□□□□ 0.82
CCDC9-204ENST00000599398 PMM1Q92871 262 aa20.18■□□□□ 0.82
CCDC9-204ENST00000599398 SPDL1Q96EA4 605 aa20.18■□□□□ 0.82
CCDC9-204ENST00000599398 MED18Q9BUE0 208 aa20.18■□□□□ 0.82
CCDC9-204ENST00000599398 KLHL4Q9C0H6 718 aa20.18■□□□□ 0.82
CCDC9-204ENST00000599398 CTPS2Q9NRF8 586 aa20.18■□□□□ 0.82
CCDC9-204ENST00000599398 A0A096LPI6 279 aa20.17■□□□□ 0.82
CCDC9-204ENST00000599398 IGHV3-15A0A0B4J1V0 119 aa20.17■□□□□ 0.82
CCDC9-204ENST00000599398 C16orf97H3BN30 126 aa20.17■□□□□ 0.82
CCDC9-204ENST00000599398 CLIC1O00299 241 aa20.17■□□□□ 0.82
CCDC9-204ENST00000599398 TFPIP10646 304 aa20.17■□□□□ 0.82
CCDC9-204ENST00000599398 NID1P14543 1247 aa20.17■□□□□ 0.82
CCDC9-204ENST00000599398 RPS4Y1P22090 263 aaKnown RBP20.17■□□□□ 0.82
CCDC9-204ENST00000599398 AGTR1P30556 359 aa20.17■□□□□ 0.82
CCDC9-204ENST00000599398 DNAJA1P31689 397 aaKnown RBP20.17■□□□□ 0.82
CCDC9-204ENST00000599398 APOBEC1P41238 236 aaKnown RBP20.17■□□□□ 0.82
CCDC9-204ENST00000599398 IDH2P48735 452 aaKnown RBP20.17■□□□□ 0.82
CCDC9-204ENST00000599398 RAC3P60763 192 aa20.17■□□□□ 0.82
CCDC9-204ENST00000599398 PLAURQ03405 335 aa20.17■□□□□ 0.82
CCDC9-204ENST00000599398 POU4F3Q15319 338 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms