RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 OSMP13725 252 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 NT5EP21589 574 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 SSTR4P31391 388 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 SOX18P35713 384 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 MXD1Q05195 221 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 ZNF273Q14593 569 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 DUSP5Q16690 384 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 IQCHQ86VS3 1027 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 MEX3DQ86XN8 651 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 TIGD4Q8IY51 512 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 OR52H1Q8NGJ2 320 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 OR9A4Q8NGU2 314 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 PTP4A1Q93096 173 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 DACT3Q96B18 629 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 IL4I1Q96RQ9 567 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 SHARPINQ9H0F6 387 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 IFT22Q9H7X7 185 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 DUXAA6NLW8 204 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 CD27P26842 260 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 MAP2K6P52564 334 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 ALDH6A1Q02252 535 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 SRSF5Q13243 272 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 CDC73Q6P1J9 531 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 ZNF730Q6ZMV8 503 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 FAM92BQ6ZTR7 304 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 CA13Q8N1Q1 262 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 ARL14Q8N4G2 192 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 C19orf47Q8N9M1 422 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 PROKR2Q8NFJ6 384 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 OR4K5Q8NGD3 323 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 TMEM163Q8TC26 289 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 PRRC1Q96M27 445 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 FUZQ9BT04 418 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 IFT46Q9NQC8 304 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 CALML5Q9NZT1 146 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 FBXL21Q9UKT6 434 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 CPSF4LA6NMK7 179 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-205ENST00000594973 METTL12A8MUP2 240 aa15.81■□□□□ 0.12
SHKBP1-205ENST00000594973 HRO43593 1189 aa15.81■□□□□ 0.12
SHKBP1-205ENST00000594973 F8A1P23610 371 aa15.81■□□□□ 0.12
SHKBP1-205ENST00000594973 TAS2R41P59536 307 aa15.81■□□□□ 0.12
SHKBP1-205ENST00000594973 RPL6Q02878 288 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-205ENST00000594973 BTN1A1Q13410 526 aa15.81■□□□□ 0.12
SHKBP1-205ENST00000594973 C1DQ13901 141 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-205ENST00000594973 ELOCQ15369 112 aa15.81■□□□□ 0.12
SHKBP1-205ENST00000594973 FCN2Q15485 313 aa15.81■□□□□ 0.12
SHKBP1-205ENST00000594973 PRAMEF8Q5VWM4 474 aa15.81■□□□□ 0.12
SHKBP1-205ENST00000594973 PRAMEF7Q5VXH5 474 aa15.81■□□□□ 0.12
SHKBP1-205ENST00000594973 PTCRAQ6ISU1 281 aaPredicted RBP15.81■□□□□ 0.12
SHKBP1-205ENST00000594973 LSRQ86X29 649 aaPredicted RBP15.81■□□□□ 0.12
SHKBP1-205ENST00000594973 NANOGP1Q8N7R0 232 aa15.81■□□□□ 0.12
SHKBP1-205ENST00000594973 OR52P1PQ8NH57 321 aa15.81■□□□□ 0.12
SHKBP1-205ENST00000594973 PHF21AQ96BD5 680 aa15.81■□□□□ 0.12
SHKBP1-205ENST00000594973 GSX2Q9BZM3 304 aa15.81■□□□□ 0.12
SHKBP1-205ENST00000594973 CAPN10Q9HC96 672 aa15.81■□□□□ 0.12
SHKBP1-205ENST00000594973 PTGFRNQ9P2B2 879 aa15.81■□□□□ 0.12
SHKBP1-205ENST00000594973 KIF25Q9UIL4 384 aa15.81■□□□□ 0.12
SHKBP1-205ENST00000594973 CHST2Q9Y4C5 530 aa15.81■□□□□ 0.12
SHKBP1-205ENST00000594973 DSPPQ9NZW4 1301 aa15.81■□□□□ 0.12
SHKBP1-205ENST00000594973 SPTBP11277 2137 aa15.81■□□□□ 0.12
SHKBP1-205ENST00000594973 SDC3O75056 442 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 NTN1O95631 604 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 ANXA3P12429 323 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 CKMT1AP12532 417 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 INPP1P49441 399 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 RNF144AP50876 292 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 EXOSC7Q15024 291 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 MANEAQ5SRI9 462 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 TFAP2EQ6VUC0 442 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 FRRS1Q6ZNA5 592 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 ZER1Q7Z7L7 766 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 LUZP2Q86TE4 346 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 HGDQ93099 445 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 HLA-CQ95604 372 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 KCTD7Q96MP8 289 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 MAP3K3Q99759 626 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 POLR2J2Q9GZM3 115 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 SLC6A15Q9H2J7 730 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 NTMQ9P121 344 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 KLF2Q9Y5W3 355 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 C7orf66A4D0T2 115 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 TLR4O00206 839 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 GPR75O95800 540 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 ACP2P11117 423 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 IL9P15248 144 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 NME1P15531 152 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 MMP11P24347 488 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 STOMP27105 288 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 FGFBP1Q14512 234 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 GPR68Q15743 365 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 HEPHL1Q6MZM0 1159 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 CNIH2Q6PI25 160 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 MCATQ8IVS2 390 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 IQCF1Q8N6M8 205 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 SGTBQ96EQ0 304 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 DPCDQ9BVM2 203 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 RDH8Q9NYR8 311 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 NTNG1Q9Y2I2 539 aa15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 MRPS17Q9Y2R5 130 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-205ENST00000594973 WDR45Q9Y484 360 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms