RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 GP6Q9HCN6 339 aa4.28□□□□□ -1.72
ERCC1-216ENST00000592444 TNFRSF19Q9NS68 423 aa4.28□□□□□ -1.72
ERCC1-216ENST00000592444 SIRT5Q9NXA8 310 aa4.28□□□□□ -1.72
ERCC1-216ENST00000592444 UTP6Q9NYH9 597 aaKnown RBP4.28□□□□□ -1.72
ERCC1-216ENST00000592444 TAS2R16Q9NYV7 291 aa4.28□□□□□ -1.72
ERCC1-216ENST00000592444 TREM2Q9NZC2 230 aa4.28□□□□□ -1.72
ERCC1-216ENST00000592444 CNIH4Q9P003 139 aa4.28□□□□□ -1.72
ERCC1-216ENST00000592444 OPN4Q9UHM6 478 aa4.28□□□□□ -1.72
ERCC1-216ENST00000592444 CNOT11Q9UKZ1 510 aaKnown RBP4.28□□□□□ -1.72
ERCC1-216ENST00000592444 EXO1Q9UQ84 846 aaKnown RBP4.28□□□□□ -1.72
ERCC1-216ENST00000592444 NAALAD2Q9Y3Q0 740 aa4.28□□□□□ -1.72
ERCC1-216ENST00000592444 CHCHD2Q9Y6H1 151 aaPredicted RBP4.28□□□□□ -1.72
ERCC1-216ENST00000592444 USH1CQ9Y6N9 552 aa4.28□□□□□ -1.72
ERCC1-216ENST00000592444 IGKV3D-11A0A0A0MRZ8 115 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 TRBV5-3A0A0A0MS03 114 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 J3QLI3 93 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 PIP5K1BO14986 540 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 STK16O75716 305 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 WDR47O94967 919 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 OR4F21O95013 312 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 ZFPL1O95159 310 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 SCELO95171 688 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 CATP04040 527 aaKnown RBP4.27□□□□□ -1.73
ERCC1-216ENST00000592444 ENO1P06733 434 aaKnown RBP4.27□□□□□ -1.73
ERCC1-216ENST00000592444 TSPAN8P19075 237 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 IL32P24001 234 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 CMPK1P30085 196 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 MASP1P48740 699 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 RPL14P50914 215 aaKnown RBP4.27□□□□□ -1.73
ERCC1-216ENST00000592444 SLC12A2P55011 1212 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 CLDN18P56856 261 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 SLC37A1P57057 533 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 NCALDP61601 193 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 OLR1P78380 273 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 RAE1P78406 368 aaKnown RBP4.27□□□□□ -1.73
ERCC1-216ENST00000592444 SRSF3P84103 164 aaKnown RBP4.27□□□□□ -1.73
ERCC1-216ENST00000592444 ASPHQ12797 758 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 GTF2H2Q13888 395 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 MST1LQ2TV78 715 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 LSM12Q3MHD2 195 aaKnown RBP4.27□□□□□ -1.73
ERCC1-216ENST00000592444 ZNF628Q5EBL2 1059 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 PIGGQ5H8A4 983 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 ATG16L1Q676U5 607 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 BICRALQ6AI39 1079 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 GRHL2Q6ISB3 625 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 GTF2H2CQ6P1K8 395 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 GALNT18Q6P9A2 607 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 RNF111Q6ZNA4 994 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 ASRGL1Q7L266 308 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 CHMP1BQ7LBR1 199 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 VN1R4Q7Z5H5 301 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 RIMKLAQ8IXN7 391 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 TCAIMQ8N3R3 496 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 ZNF321PQ8N8H1 164 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 ANKRD53Q8N9V6 530 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 PPFIBP2Q8ND30 876 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 ZNF740Q8NDX6 193 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 CFAP61Q8NHU2 1237 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 FBXO27Q8NI29 283 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 ADAMTS16Q8TE57 1224 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 TWIST2Q8WVJ9 160 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 GATAD2BQ8WXI9 593 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 EXT2Q93063 718 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 PYCR2Q96C36 320 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 SLC7A6OSQ96CW6 309 aaPredicted RBP4.27□□□□□ -1.73
ERCC1-216ENST00000592444 SPACA9Q96E40 222 aaPredicted RBP4.27□□□□□ -1.73
ERCC1-216ENST00000592444 HBEGFQ99075 208 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 CCDC28BQ9BUN5 200 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 ACPTQ9BZG2 426 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 RABEP2Q9H5N1 569 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 RNF122Q9H9V4 155 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 FOLH1BQ9HBA9 442 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 SAR1AQ9NR31 198 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 SDR39U1Q9NRG7 319 aaPredicted RBP4.27□□□□□ -1.73
ERCC1-216ENST00000592444 FARSBQ9NSD9 589 aaKnown RBP4.27□□□□□ -1.73
ERCC1-216ENST00000592444 GPRC5BQ9NZH0 403 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 NPAP1Q9NZP6 1156 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 REV1Q9UBZ9 1251 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 MARCOQ9UEW3 520 aaPredicted RBP4.27□□□□□ -1.73
ERCC1-216ENST00000592444 GIMAP2Q9UG22 337 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 UTS2RQ9UKP6 389 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 NUP50Q9UKX7 468 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 ZNF490Q9ULM2 529 aaPredicted RBP4.27□□□□□ -1.73
ERCC1-216ENST00000592444 ARL2BPQ9Y2Y0 163 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 RNF11Q9Y3C5 154 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 PCDHB14Q9Y5E9 798 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 TNPO3Q9Y5L0 923 aaKnown RBP4.27□□□□□ -1.73
ERCC1-216ENST00000592444 GPR45Q9Y5Y3 372 aa4.27□□□□□ -1.73
ERCC1-216ENST00000592444 PCNX3Q9H6A9 2034 aa4.26□□□□□ -1.73
ERCC1-216ENST00000592444 NCF1BA6NI72 391 aaPredicted RBP4.26□□□□□ -1.73
ERCC1-216ENST00000592444 NCF1CA8MVU1 366 aaPredicted RBP4.26□□□□□ -1.73
ERCC1-216ENST00000592444 LYNX1G3V0Z9 82 aa4.26□□□□□ -1.73
ERCC1-216ENST00000592444 H0YC42 278 aa4.26□□□□□ -1.73
ERCC1-216ENST00000592444 H0YL77 283 aa4.26□□□□□ -1.73
ERCC1-216ENST00000592444 MANBAO00462 879 aa4.26□□□□□ -1.73
ERCC1-216ENST00000592444 NDUFAB1O14561 156 aa4.26□□□□□ -1.73
ERCC1-216ENST00000592444 WNT9BO14905 357 aa4.26□□□□□ -1.73
ERCC1-216ENST00000592444 HAT1O14929 419 aa4.26□□□□□ -1.73
ERCC1-216ENST00000592444 AZIN1O14977 448 aa4.26□□□□□ -1.73
ERCC1-216ENST00000592444 SLC22A2O15244 555 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms