RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 RAP2CQ9Y3L5 183 aa15.33■□□□□ 0.04
RETREG3-210ENST00000590541 FREM1Q5H8C1 2179 aa15.33■□□□□ 0.04
RETREG3-210ENST00000590541 GXYLT2A0PJZ3 443 aa15.32■□□□□ 0.04
RETREG3-210ENST00000590541 SLC35F4A4IF30 521 aa15.32■□□□□ 0.04
RETREG3-210ENST00000590541 ABCD4O14678 606 aa15.32■□□□□ 0.04
RETREG3-210ENST00000590541 SKAP2O75563 359 aaPredicted RBP15.32■□□□□ 0.04
RETREG3-210ENST00000590541 DHRS4L1P0CG22 281 aa15.32■□□□□ 0.04
RETREG3-210ENST00000590541 HPGDP15428 266 aa15.32■□□□□ 0.04
RETREG3-210ENST00000590541 SHC1P29353 583 aa15.32■□□□□ 0.04
RETREG3-210ENST00000590541 TTKP33981 857 aa15.32■□□□□ 0.04
RETREG3-210ENST00000590541 CARD18P57730 90 aa15.32■□□□□ 0.04
RETREG3-210ENST00000590541 ABCE1P61221 599 aaKnown RBP15.32■□□□□ 0.04
RETREG3-210ENST00000590541 CHI3L2Q15782 390 aa15.32■□□□□ 0.04
RETREG3-210ENST00000590541 EXOSC6Q5RKV6 272 aaKnown RBP15.32■□□□□ 0.04
RETREG3-210ENST00000590541 CEP85LQ5SZL2 805 aa15.32■□□□□ 0.04
RETREG3-210ENST00000590541 PDSS1Q5T2R2 415 aa15.32■□□□□ 0.04
RETREG3-210ENST00000590541 BHLHB9Q6PI77 547 aa15.32■□□□□ 0.04
RETREG3-210ENST00000590541 SLC16A11Q8NCK7 471 aa15.32■□□□□ 0.04
RETREG3-210ENST00000590541 OR56A1Q8NGH5 318 aa15.32■□□□□ 0.04
RETREG3-210ENST00000590541 C10orf105Q8TEF2 133 aa15.32■□□□□ 0.04
RETREG3-210ENST00000590541 FAM168AQ92567 244 aa15.32■□□□□ 0.04
RETREG3-210ENST00000590541 PIK3R3Q92569 461 aa15.32■□□□□ 0.04
RETREG3-210ENST00000590541 FAM120BQ96EK7 910 aaKnown RBP15.32■□□□□ 0.04
RETREG3-210ENST00000590541 KLHL15Q96M94 604 aa15.32■□□□□ 0.04
RETREG3-210ENST00000590541 BTBD2Q9BX70 525 aa15.32■□□□□ 0.04
RETREG3-210ENST00000590541 SRXN1Q9BYN0 137 aa15.32■□□□□ 0.04
RETREG3-210ENST00000590541 BHLHE41Q9C0J9 482 aaPredicted RBP15.32■□□□□ 0.04
RETREG3-210ENST00000590541 UBQLN4Q9NRR5 601 aa15.32■□□□□ 0.04
RETREG3-210ENST00000590541 CBLN4Q9NTU7 201 aa15.32■□□□□ 0.04
RETREG3-210ENST00000590541 ZCCHC3Q9NUD5 404 aaKnown RBP15.32■□□□□ 0.04
RETREG3-210ENST00000590541 NPAP1Q9NZP6 1156 aa15.32■□□□□ 0.04
RETREG3-210ENST00000590541 GOLGA8QA0A0J9YX86 632 aa15.31■□□□□ 0.04
RETREG3-210ENST00000590541 A0A1W2PQD3 144 aa15.31■□□□□ 0.04
RETREG3-210ENST00000590541 GOLGA8OA6NCC3 632 aa15.31■□□□□ 0.04
RETREG3-210ENST00000590541 E7EQL1 145 aa15.31■□□□□ 0.04
RETREG3-210ENST00000590541 GOLGA8NF8WBI6 632 aa15.31■□□□□ 0.04
RETREG3-210ENST00000590541 NDUFB5O43674 189 aa15.31■□□□□ 0.04
RETREG3-210ENST00000590541 KCNK2O95069 426 aa15.31■□□□□ 0.04
RETREG3-210ENST00000590541 HMGN2P05204 90 aaKnown RBP15.31■□□□□ 0.04
RETREG3-210ENST00000590541 PABPC4LP0CB38 370 aaKnown RBP15.31■□□□□ 0.04
RETREG3-210ENST00000590541 ACP2P11117 423 aa15.31■□□□□ 0.04
RETREG3-210ENST00000590541 LAMP1P11279 417 aa15.31■□□□□ 0.04
RETREG3-210ENST00000590541 CCT3P49368 545 aaKnown RBP15.31■□□□□ 0.04
RETREG3-210ENST00000590541 RPL14P50914 215 aaKnown RBP15.31■□□□□ 0.04
RETREG3-210ENST00000590541 CLDN8P56748 225 aa15.31■□□□□ 0.04
RETREG3-210ENST00000590541 POU6F2P78424 691 aaPredicted RBP15.31■□□□□ 0.04
RETREG3-210ENST00000590541 PTGR1Q14914 329 aa15.31■□□□□ 0.04
RETREG3-210ENST00000590541 PPA1Q15181 289 aa15.31■□□□□ 0.04
RETREG3-210ENST00000590541 RNPS1Q15287 305 aaKnown RBP15.31■□□□□ 0.04
RETREG3-210ENST00000590541 STK11Q15831 433 aa15.31■□□□□ 0.04
RETREG3-210ENST00000590541 FAM120AOSQ5T036 256 aa15.31■□□□□ 0.04
RETREG3-210ENST00000590541 RIMKLAQ8IXN7 391 aa15.31■□□□□ 0.04
RETREG3-210ENST00000590541 LILRA2Q8N149 483 aa15.31■□□□□ 0.04
RETREG3-210ENST00000590541 COX18Q8N8Q8 333 aa15.31■□□□□ 0.04
RETREG3-210ENST00000590541 OR4C3Q8NH37 302 aa15.31■□□□□ 0.04
RETREG3-210ENST00000590541 SFXN5Q8TD22 340 aa15.31■□□□□ 0.04
RETREG3-210ENST00000590541 C1orf50Q9BV19 199 aa15.31■□□□□ 0.04
RETREG3-210ENST00000590541 CENPHQ9H3R5 247 aa15.31■□□□□ 0.04
RETREG3-210ENST00000590541 PIGUQ9H490 435 aa15.31■□□□□ 0.04
RETREG3-210ENST00000590541 SIRT3Q9NTG7 399 aaPredicted RBP15.31■□□□□ 0.04
RETREG3-210ENST00000590541 HAO1Q9UJM8 370 aa15.31■□□□□ 0.04
RETREG3-210ENST00000590541 MALRD1Q5VYJ5 2156 aa15.31■□□□□ 0.04
RETREG3-210ENST00000590541 WDR91A4D1P6 747 aa15.3■□□□□ 0.04
RETREG3-210ENST00000590541 LYZL6O75951 148 aa15.3■□□□□ 0.04
RETREG3-210ENST00000590541 OXSR1O95747 527 aaPredicted RBP15.3■□□□□ 0.04
RETREG3-210ENST00000590541 YES1P07947 543 aa15.3■□□□□ 0.04
RETREG3-210ENST00000590541 ME2P23368 584 aa15.3■□□□□ 0.04
RETREG3-210ENST00000590541 SFTPDP35247 375 aa15.3■□□□□ 0.04
RETREG3-210ENST00000590541 SLC1A6P48664 564 aa15.3■□□□□ 0.04
RETREG3-210ENST00000590541 ZNF41P51814 821 aaPredicted RBP15.3■□□□□ 0.04
RETREG3-210ENST00000590541 LSM11P83369 360 aaKnown RBP eCLIP15.3■□□□□ 0.04
RETREG3-210ENST00000590541 RAB35Q15286 201 aa15.3■□□□□ 0.04
RETREG3-210ENST00000590541 DUSP5Q16690 384 aa15.3■□□□□ 0.04
RETREG3-210ENST00000590541 CDC73Q6P1J9 531 aa15.3■□□□□ 0.04
RETREG3-210ENST00000590541 Q6ZT83 130 aa15.3■□□□□ 0.04
RETREG3-210ENST00000590541 GATSQ8NAP1 163 aa15.3■□□□□ 0.04
RETREG3-210ENST00000590541 ACTRT2Q8TDY3 377 aa15.3■□□□□ 0.04
RETREG3-210ENST00000590541 JADE3Q92613 823 aa15.3■□□□□ 0.04
RETREG3-210ENST00000590541 PROX1Q92786 737 aa15.3■□□□□ 0.04
RETREG3-210ENST00000590541 CPNE4Q96A23 557 aaPredicted RBP15.3■□□□□ 0.04
RETREG3-210ENST00000590541 REXO5Q96IC2 774 aaKnown RBP15.3■□□□□ 0.04
RETREG3-210ENST00000590541 PKNOX2Q96KN3 472 aa15.3■□□□□ 0.04
RETREG3-210ENST00000590541 DUSP26Q9BV47 211 aa15.3■□□□□ 0.04
RETREG3-210ENST00000590541 ACTRT3Q9BYD9 372 aa15.3■□□□□ 0.04
RETREG3-210ENST00000590541 HOXD1Q9GZZ0 328 aa15.3■□□□□ 0.04
RETREG3-210ENST00000590541 CHODLQ9H9P2 273 aa15.3■□□□□ 0.04
RETREG3-210ENST00000590541 GP6Q9HCN6 339 aa15.3■□□□□ 0.04
RETREG3-210ENST00000590541 KCNK9Q9NPC2 374 aa15.3■□□□□ 0.04
RETREG3-210ENST00000590541 GIMAP2Q9UG22 337 aa15.3■□□□□ 0.04
RETREG3-210ENST00000590541 KCNS2Q9ULS6 477 aa15.3■□□□□ 0.04
RETREG3-210ENST00000590541 FAF1Q9UNN5 650 aaPredicted RBP15.3■□□□□ 0.04
RETREG3-210ENST00000590541 NUP214P35658 2090 aaPredicted RBP15.29■□□□□ 0.04
RETREG3-210ENST00000590541 SCDO00767 359 aa15.29■□□□□ 0.04
RETREG3-210ENST00000590541 ITM2AO43736 263 aa15.29■□□□□ 0.04
RETREG3-210ENST00000590541 EFNA2O43921 213 aa15.29■□□□□ 0.04
RETREG3-210ENST00000590541 PRKD3O94806 890 aa15.29■□□□□ 0.04
RETREG3-210ENST00000590541 PGRP06401 933 aa15.29■□□□□ 0.04
RETREG3-210ENST00000590541 G6PDP11413 515 aa15.29■□□□□ 0.04
RETREG3-210ENST00000590541 USF1P22415 310 aaPredicted RBP15.29■□□□□ 0.04
RETREG3-210ENST00000590541 TP53BP2Q13625 1128 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms