RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 GATSQ8NAP1 163 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 OR52L1Q8NGH7 329 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 BRIX1Q8TDN6 353 aaKnown RBP12.63□□□□□ -0.39
TPM1-215ENST00000558868 ELP5Q8TE02 316 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 UBE2FQ969M7 185 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 NACC2Q96BF6 587 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 C8orf44Q96CB5 159 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 DGCR14Q96DF8 476 aaKnown RBP12.63□□□□□ -0.39
TPM1-215ENST00000558868 BPIFA2Q96DR5 249 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 ZNF426Q9BUY5 554 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 ZBTB20Q9HC78 741 aaPredicted RBP12.63□□□□□ -0.39
TPM1-215ENST00000558868 PARD6AQ9NPB6 346 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 TBC1D23Q9NUY8 699 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 IL20Q9NYY1 176 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 CARD8Q9Y2G2 431 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 FAM208BQ5VWN6 2430 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 ZNF292O60281 2723 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 A0A087WUJ7 227 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 EFCAB10A6NFE3 127 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 ELOA3DA6NLF2 546 aaPredicted RBP12.62□□□□□ -0.39
TPM1-215ENST00000558868 SNTNA6NMZ2 147 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 CLCA1A8K7I4 914 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 EFCAB9A8MZ26 197 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 HCN1O60741 890 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 IGF2P01344 180 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 ICAM2P13598 275 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 BMP7P18075 431 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 EVI2BP34910 448 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 RPS15P62841 145 aaKnown RBP12.62□□□□□ -0.39
TPM1-215ENST00000558868 LSM11P83369 360 aaKnown RBP eCLIP12.62□□□□□ -0.39
TPM1-215ENST00000558868 OCLNQ16625 522 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 BTBD16Q32M84 506 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 NDUFAF6Q330K2 333 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 ELOA3BQ3SY89 546 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 HES3Q5TGS1 186 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 PLAG1Q6DJT9 500 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 APOOLQ6UXV4 268 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 WDR88Q6ZMY6 472 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 ZNF620Q6ZNG0 422 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 NDUFAF7Q7L592 441 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 PRSS48Q7RTY5 328 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 MRGPREQ86SM8 312 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 MARCH3Q86UD3 253 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 KIF18BQ86Y91 864 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 CACTIN-AS1Q8N1I8 211 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 FAM26EQ8N5C1 309 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 ELOA3Q8NG57 546 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 OR5W2Q8NH69 310 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 ZNF563Q8TA94 476 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 C3orf49Q96BT1 292 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 TSSK6Q9BXA6 273 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 CCDC90BQ9GZT6 254 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 EGLN3Q9H6Z9 239 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 MMP25Q9NPA2 562 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 MED17Q9NVC6 651 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 TOR4AQ9NXH8 423 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 TVP23BQ9NYZ1 205 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 CNOT2Q9NZN8 540 aaKnown RBP12.62□□□□□ -0.39
TPM1-215ENST00000558868 MYOTQ9UBF9 498 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 PSORS1C1Q9UIG5 152 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 ICAM5Q9UMF0 924 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 FARSAQ9Y285 508 aaKnown RBP12.62□□□□□ -0.39
TPM1-215ENST00000558868 PCDHGB6Q9Y5F9 930 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 PCDHGB1Q9Y5G3 927 aa12.62□□□□□ -0.39
TPM1-215ENST00000558868 NSG1A0A0A6YYJ2 146 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 TEX51A0A1B0GUA7 166 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 M0R3G1 203 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 WWP2O00308 870 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 HCRTR2O43614 444 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 ADAM11O75078 769 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 NADKO95544 446 aaPredicted RBP12.61□□□□□ -0.39
TPM1-215ENST00000558868 IGFBP1P08833 259 aaPredicted RBP12.61□□□□□ -0.39
TPM1-215ENST00000558868 TCN2P20062 427 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 NBL1P41271 181 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 SLC1A3P43003 542 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 SLC9A3P48764 834 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 P2RX1P51575 399 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 SUMO3P55854 103 aaPredicted RBP12.61□□□□□ -0.39
TPM1-215ENST00000558868 ZNF117Q03924 483 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 C17orf67Q0P5P2 114 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 TUBA3CQ13748 450 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 CBFBQ13951 182 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 SSPNQ14714 243 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 SNAPC1Q16533 368 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 DHRS13Q6UX07 377 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 CCDC103Q8IW40 242 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 DND1Q8IYX4 353 aaKnown RBP12.61□□□□□ -0.39
TPM1-215ENST00000558868 OR2T33Q8NG76 320 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 PFN4Q8NHR9 129 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 FANK1Q8TC84 345 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 CT55Q8WUE5 264 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 HGDQ93099 445 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 SGTBQ96EQ0 304 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 PLEKHA8Q96JA3 519 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 IMMP1LQ96LU5 166 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 COPS4Q9BT78 406 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 TMEM43Q9BTV4 400 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 DPH1Q9BZG8 443 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 SPRY4Q9C004 299 aa12.61□□□□□ -0.39
TPM1-215ENST00000558868 DSN1Q9H410 356 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms