RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 SESN3P58005 492 aa15.31■□□□□ 0.04
GPHN-211ENST00000556020 FUT5Q11128 374 aa15.31■□□□□ 0.04
GPHN-211ENST00000556020 MERTKQ12866 999 aa15.31■□□□□ 0.04
GPHN-211ENST00000556020 ACKR1Q16570 336 aa15.31■□□□□ 0.04
GPHN-211ENST00000556020 SLC25A53Q5H9E4 307 aa15.31■□□□□ 0.04
GPHN-211ENST00000556020 NXNQ6DKJ4 435 aa15.31■□□□□ 0.04
GPHN-211ENST00000556020 OGFOD2Q6N063 350 aa15.31■□□□□ 0.04
GPHN-211ENST00000556020 CXorf67Q86X51 503 aaPredicted RBP15.31■□□□□ 0.04
GPHN-211ENST00000556020 RNF130Q86XS8 419 aa15.31■□□□□ 0.04
GPHN-211ENST00000556020 ZNF563Q8TA94 476 aa15.31■□□□□ 0.04
GPHN-211ENST00000556020 NEURL3Q96EH8 262 aa15.31■□□□□ 0.04
GPHN-211ENST00000556020 MARK4Q96L34 752 aa15.31■□□□□ 0.04
GPHN-211ENST00000556020 PANX1Q96RD7 426 aa15.31■□□□□ 0.04
GPHN-211ENST00000556020 CCL19Q99731 98 aa15.31■□□□□ 0.04
GPHN-211ENST00000556020 INPP5KQ9BT40 448 aa15.31■□□□□ 0.04
GPHN-211ENST00000556020 GSX1Q9H4S2 264 aaPredicted RBP15.31■□□□□ 0.04
GPHN-211ENST00000556020 DSCAMO60469 2012 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 BCAS1O75363 584 aaPredicted RBP15.3■□□□□ 0.04
GPHN-211ENST00000556020 GSNP06396 782 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 NID1P14543 1247 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 PGCP20142 388 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 LOXP28300 417 aaPredicted RBP15.3■□□□□ 0.04
GPHN-211ENST00000556020 IL12AP29459 219 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 MAGOHP61326 146 aaKnown RBP15.3■□□□□ 0.04
GPHN-211ENST00000556020 BEX5Q5H9J7 111 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 C3orf33Q6P1S2 294 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 TFAP2EQ6VUC0 442 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 FRRS1Q6ZNA5 592 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 ZNF621Q6ZSS3 439 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 SPATA19Q7Z5L4 167 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 P3H2Q8IVL5 708 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 LRRC34Q8IZ02 419 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 ZNF619Q8N2I2 560 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 PNPT1Q8TCS8 783 aaKnown RBP15.3■□□□□ 0.04
GPHN-211ENST00000556020 TMEM234Q8WY98 164 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 ST8SIA1Q92185 356 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 S100PBPQ96BU1 408 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 ZNF775Q96BV0 537 aaPredicted RBP15.3■□□□□ 0.04
GPHN-211ENST00000556020 ZG16BQ96DA0 208 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 DNAJA3Q96EY1 480 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 CCDC115Q96NT0 180 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 OR52E6Q96RD3 313 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 ZBTB18Q99592 522 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 SERINC1Q9NRX5 453 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 THAP1Q9NVV9 213 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 BTNL2Q9UIR0 455 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 GPR52Q9Y2T5 361 aa15.3■□□□□ 0.04
GPHN-211ENST00000556020 FREM1Q5H8C1 2179 aa15.29■□□□□ 0.04
GPHN-211ENST00000556020 ZNF469Q96JG9 3925 aaPredicted RBP15.29■□□□□ 0.04
GPHN-211ENST00000556020 CCDC154A6NI56 674 aa15.29■□□□□ 0.04
GPHN-211ENST00000556020 CLDN24A6NM45 220 aa15.29■□□□□ 0.04
GPHN-211ENST00000556020 TRPC5OSA6NMA1 111 aa15.29■□□□□ 0.04
GPHN-211ENST00000556020 HDAC3O15379 428 aa15.29■□□□□ 0.04
GPHN-211ENST00000556020 KLF4O43474 513 aa15.29■□□□□ 0.04
GPHN-211ENST00000556020 YES1P07947 543 aa15.29■□□□□ 0.04
GPHN-211ENST00000556020 TFPIP10646 304 aa15.29■□□□□ 0.04
GPHN-211ENST00000556020 FPR1P21462 350 aa15.29■□□□□ 0.04
GPHN-211ENST00000556020 HOXC12P31275 282 aa15.29■□□□□ 0.04
GPHN-211ENST00000556020 PGM1P36871 562 aa15.29■□□□□ 0.04
GPHN-211ENST00000556020 CDKN2CP42773 168 aa15.29■□□□□ 0.04
GPHN-211ENST00000556020 RAC3P60763 192 aa15.29■□□□□ 0.04
GPHN-211ENST00000556020 CHRNEQ04844 493 aa15.29■□□□□ 0.04
GPHN-211ENST00000556020 Q5PR19 223 aa15.29■□□□□ 0.04
GPHN-211ENST00000556020 DNAJC14Q6Y2X3 702 aaPredicted RBP15.29■□□□□ 0.04
GPHN-211ENST00000556020 PLEKHM3Q6ZWE6 761 aa15.29■□□□□ 0.04
GPHN-211ENST00000556020 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.29■□□□□ 0.04
GPHN-211ENST00000556020 LSRQ86X29 649 aaPredicted RBP15.29■□□□□ 0.04
GPHN-211ENST00000556020 TRIML2Q8N7C3 387 aa15.29■□□□□ 0.04
GPHN-211ENST00000556020 ANKFN1Q8N957 763 aa15.29■□□□□ 0.04
GPHN-211ENST00000556020 PIGTQ969N2 578 aa15.29■□□□□ 0.04
GPHN-211ENST00000556020 PLPPR2Q96GM1 343 aa15.29■□□□□ 0.04
GPHN-211ENST00000556020 POLE3Q9NRF9 147 aa15.29■□□□□ 0.04
GPHN-211ENST00000556020 ACER3Q9NUN7 267 aa15.29■□□□□ 0.04
GPHN-211ENST00000556020 NKIRAS1Q9NYS0 192 aa15.29■□□□□ 0.04
GPHN-211ENST00000556020 SLC35A3Q9Y2D2 325 aa15.29■□□□□ 0.04
GPHN-211ENST00000556020 RAI1Q7Z5J4 1906 aaPredicted RBP15.29■□□□□ 0.04
GPHN-211ENST00000556020 PRAMEF27A3QJZ7 478 aa15.28■□□□□ 0.04
GPHN-211ENST00000556020 HMGN4O00479 90 aa15.28■□□□□ 0.04
GPHN-211ENST00000556020 SMAD9O15198 467 aaKnown RBP15.28■□□□□ 0.04
GPHN-211ENST00000556020 ARHGEF9O43307 516 aa15.28■□□□□ 0.04
GPHN-211ENST00000556020 SNNO75324 88 aaPredicted RBP15.28■□□□□ 0.04
GPHN-211ENST00000556020 PLAUP00749 431 aa15.28■□□□□ 0.04
GPHN-211ENST00000556020 ADAP00813 363 aa15.28■□□□□ 0.04
GPHN-211ENST00000556020 PGRP06401 933 aa15.28■□□□□ 0.04
GPHN-211ENST00000556020 CCNA2P20248 432 aa15.28■□□□□ 0.04
GPHN-211ENST00000556020 IL32P24001 234 aa15.28■□□□□ 0.04
GPHN-211ENST00000556020 RASGEF1BQ0VAM2 473 aa15.28■□□□□ 0.04
GPHN-211ENST00000556020 SYPL1Q16563 259 aa15.28■□□□□ 0.04
GPHN-211ENST00000556020 ATG16L1Q676U5 607 aa15.28■□□□□ 0.04
GPHN-211ENST00000556020 ZNF704Q6ZNC4 412 aaPredicted RBP15.28■□□□□ 0.04
GPHN-211ENST00000556020 KRTAP1-3Q8IUG1 177 aa15.28■□□□□ 0.04
GPHN-211ENST00000556020 SLC43A2Q8N370 569 aa15.28■□□□□ 0.04
GPHN-211ENST00000556020 STEAP2Q8NFT2 490 aa15.28■□□□□ 0.04
GPHN-211ENST00000556020 PERPQ96FX8 193 aa15.28■□□□□ 0.04
GPHN-211ENST00000556020 PSD2Q9BQI7 771 aa15.28■□□□□ 0.04
GPHN-211ENST00000556020 MANSC1Q9H8J5 431 aa15.28■□□□□ 0.04
GPHN-211ENST00000556020 DLL4Q9NR61 685 aa15.28■□□□□ 0.04
GPHN-211ENST00000556020 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.28■□□□□ 0.04
GPHN-211ENST00000556020 KLHL9Q9P2J3 617 aa15.28■□□□□ 0.04
GPHN-211ENST00000556020 GPR45Q9Y5Y3 372 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms