RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 ATP5A1P25705 553 aaKnown RBP3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 HOXD3P31249 432 aaPredicted RBP3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 DCTDP32321 178 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 HPDP32754 393 aaPredicted RBP3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 CA7P43166 264 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 THBS3P49746 956 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 HLCSP50747 726 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 HNRNPFP52597 415 aaKnown RBP3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 CASP6P55212 293 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 NAA20P61599 178 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 RPP30P78346 268 aaKnown RBP3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 IGLV3-21P80748 117 aaPredicted RBP3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 OC90Q02509 493 aaPredicted RBP3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 RBPJQ06330 500 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 TGM3Q08188 693 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 CUL3Q13618 768 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 C3AR1Q16581 482 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 HIST2H2ACQ16777 129 aaPredicted RBP3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 CCDC153Q494R4 210 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 GGTA1PQ4G0N0 100 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 ZNF678Q5SXM1 525 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 KHDRBS2Q5VWX1 349 aaKnown RBP3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 HIST2H2AA3Q6FI13 130 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 MED27Q6P2C8 311 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 TRIM40Q6P9F5 258 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 ZYG11AQ6WRX3 759 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 Q6ZPB1 254 aaPredicted RBP3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 GALNTL5Q7Z4T8 443 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 GOLGA7Q7Z5G4 137 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 CROCCP2Q86T23 111 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 EXOC3L1Q86VI1 746 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 SLC22A9Q8IVM8 553 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 SIAH3Q8IW03 269 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 CHERPQ8IWX8 916 aaKnown RBP3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 ZNF595Q8IYB9 648 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 SLC34A3Q8N130 599 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 TEX9Q8N6V9 391 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 ACOT4Q8N9L9 421 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 TEX45Q8NA69 505 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 ZFP62Q8NB50 900 aaPredicted RBP3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 TMEM178AQ8NBL3 297 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 HUS1BQ8NHY5 278 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 WDR20Q8TBZ3 569 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 RDH11Q8TC12 318 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 TRPC4APQ8TEL6 797 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 ITLN2Q8WWU7 325 aaPredicted RBP3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 NEUROG1Q92886 237 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 EXT2Q93063 718 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 NCLNQ969V3 563 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 ANKRD9Q96BM1 317 aaPredicted RBP3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 RNF183Q96D59 192 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 CCDC126Q96EE4 140 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 PHF21BQ96EK2 531 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 L3HYPDHQ96EM0 354 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 C11orf24Q96F05 449 aaPredicted RBP3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 CMTM7Q96FZ5 175 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 PGM2Q96G03 612 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 VMP1Q96GC9 406 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 ZNF479Q96JC4 524 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 ZNF382Q96SR6 550 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 CSF3RQ99062 836 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 MAPKAP1Q9BPZ7 522 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 TBCDQ9BTW9 1192 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 MS4A8Q9BY19 250 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 DEFB126Q9BYW3 111 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 ROGDIQ9GZN7 287 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 NOL11Q9H8H0 719 aaKnown RBP3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 DDX31Q9H8H2 851 aaKnown RBP3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 LYRM4Q9HD34 91 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 ADAP2Q9NPF8 381 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 KLHL1Q9NR64 748 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 PNO1Q9NRX1 252 aaKnown RBP3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 SNTG1Q9NSN8 517 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 SENP1Q9P0U3 644 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 CPSF2Q9P2I0 782 aaKnown RBP3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 OPTCQ9UBM4 332 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 TBK1Q9UHD2 729 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 ZNF225Q9UK10 706 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 PCTPQ9UKL6 214 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 FBXW2Q9UKT8 454 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 NPIPA1Q9UND3 350 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 MRPS33Q9Y291 106 aaKnown RBP3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 MEMO1Q9Y316 297 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 RNF11Q9Y3C5 154 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 CPAMD8Q8IZJ3 1885 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 EML6Q6ZMW3 1958 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 NINQ8N4C6 2090 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 CENPEQ02224 2701 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 FLNBO75369 2602 aaKnown RBP3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 HECTD1Q9ULT8 2610 aa3.19□□□□□ -1.9
UBE2D3-226ENST00000508635 UTP20O75691 2785 aaKnown RBP3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 PCNX1Q96RV3 2341 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 DNAJC13O75165 2243 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 IGKV2D-30A0A075B6S6 120 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 SYNDIG1LA6NDD5 238 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 FAM90A8PA6NJQ4 464 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 C17orf105B2RV13 164 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 TEX22C9J3V5 150 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 PRSS44E7EML9 344 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 H3BQF6 201 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms