RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 SLC35A3Q9Y2D2 325 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 FREM1Q5H8C1 2179 aa11.53□□□□□ -0.56
HDAC1-209ENST00000484305 A0A1W2PNR3 127 aa11.53□□□□□ -0.56
HDAC1-209ENST00000484305 SH3D21A4FU49 640 aa11.53□□□□□ -0.56
HDAC1-209ENST00000484305 AGAP5A6NIR3 686 aa11.53□□□□□ -0.56
HDAC1-209ENST00000484305 GJE1A6NN92 205 aa11.53□□□□□ -0.56
HDAC1-209ENST00000484305 ADAM11O75078 769 aa11.53□□□□□ -0.56
HDAC1-209ENST00000484305 SS18L1O75177 396 aaPredicted RBP11.53□□□□□ -0.56
HDAC1-209ENST00000484305 NR2F1P10589 423 aa11.53□□□□□ -0.56
HDAC1-209ENST00000484305 ETFAP13804 333 aa11.53□□□□□ -0.56
HDAC1-209ENST00000484305 PGCP20142 388 aa11.53□□□□□ -0.56
HDAC1-209ENST00000484305 RYKP34925 604 aa11.53□□□□□ -0.56
HDAC1-209ENST00000484305 CD79BP40259 229 aa11.53□□□□□ -0.56
HDAC1-209ENST00000484305 CRATP43155 626 aa11.53□□□□□ -0.56
HDAC1-209ENST00000484305 MRPL19P49406 292 aaKnown RBP11.53□□□□□ -0.56
HDAC1-209ENST00000484305 ANXA11P50995 505 aaKnown RBP11.53□□□□□ -0.56
HDAC1-209ENST00000484305 SELENBP1Q13228 472 aa11.53□□□□□ -0.56
HDAC1-209ENST00000484305 ZNF239Q16600 458 aaKnown RBP11.53□□□□□ -0.56
HDAC1-209ENST00000484305 C6orf10Q5SRN2 563 aa11.53□□□□□ -0.56
HDAC1-209ENST00000484305 SLC2A7Q6PXP3 512 aa11.53□□□□□ -0.56
HDAC1-209ENST00000484305 LRRC74BQ6ZQY2 392 aa11.53□□□□□ -0.56
HDAC1-209ENST00000484305 FUNDC1Q8IVP5 155 aa11.53□□□□□ -0.56
HDAC1-209ENST00000484305 ST8SIA1Q92185 356 aa11.53□□□□□ -0.56
HDAC1-209ENST00000484305 CNOT9Q92600 299 aaKnown RBP11.53□□□□□ -0.56
HDAC1-209ENST00000484305 GTF2H4Q92759 462 aa11.53□□□□□ -0.56
HDAC1-209ENST00000484305 CPNE4Q96A23 557 aaPredicted RBP11.53□□□□□ -0.56
HDAC1-209ENST00000484305 DACH2Q96NX9 599 aa11.53□□□□□ -0.56
HDAC1-209ENST00000484305 CCDC28BQ9BUN5 200 aa11.53□□□□□ -0.56
HDAC1-209ENST00000484305 LIME1Q9H400 295 aa11.53□□□□□ -0.56
HDAC1-209ENST00000484305 MTHFD2LQ9H903 347 aaPredicted RBP11.53□□□□□ -0.56
HDAC1-209ENST00000484305 PLSCR4Q9NRQ2 329 aa11.53□□□□□ -0.56
HDAC1-209ENST00000484305 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.53□□□□□ -0.56
HDAC1-209ENST00000484305 EMC9Q9Y3B6 208 aa11.53□□□□□ -0.56
HDAC1-209ENST00000484305 PCDHB14Q9Y5E9 798 aa11.53□□□□□ -0.56
HDAC1-209ENST00000484305 POU2F1P14859 743 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 CD1EP15812 388 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 RPS4Y1P22090 263 aaKnown RBP11.52□□□□□ -0.57
HDAC1-209ENST00000484305 DNAJA1P31689 397 aaKnown RBP11.52□□□□□ -0.57
HDAC1-209ENST00000484305 CCKARP32238 428 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 UGT2B10P36537 528 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 KCNJ5P48544 419 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 PCYT1AP49585 367 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 CTBP2P56545 445 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 STX1BP61266 288 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 MERTKQ12866 999 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 BLOC1S3Q6QNY0 202 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 PLEKHM3Q6ZWE6 761 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 CDC20BQ86Y33 519 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 ARFGAP2Q8N6H7 521 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 OR6K3Q8NGY3 331 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 RNF128Q8TEB7 428 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 ABHD3Q8WU67 409 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 TMEM234Q8WY98 164 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 THOC1Q96FV9 657 aaKnown RBP11.52□□□□□ -0.57
HDAC1-209ENST00000484305 REXO5Q96IC2 774 aaKnown RBP11.52□□□□□ -0.57
HDAC1-209ENST00000484305 MAGEB18Q96M61 343 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 WFIKKN1Q96NZ8 548 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 SLC39A3Q9BRY0 314 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 PAIP1Q9H074 479 aaKnown RBP11.52□□□□□ -0.57
HDAC1-209ENST00000484305 SLC52A3Q9NQ40 469 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 TIGARQ9NQ88 270 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 EXOSC3Q9NQT5 275 aaKnown RBP11.52□□□□□ -0.57
HDAC1-209ENST00000484305 CTPS2Q9NRF8 586 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 GLRX2Q9NS18 164 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 ACER3Q9NUN7 267 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 ELOVL5Q9NYP7 299 aa11.52□□□□□ -0.57
HDAC1-209ENST00000484305 IGHV3-15A0A0B4J1V0 119 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 NR5A2O00482 541 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 TFPTP0C1Z6 253 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 IL7RP16871 459 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 HOXB9P17482 250 aaPredicted RBP11.51□□□□□ -0.57
HDAC1-209ENST00000484305 ENPP1P22413 925 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 AGTR1P30556 359 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 SLC7A1P30825 629 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 MAGEA8P43361 318 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 DSTNP60981 165 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 EXOC3L2Q2M3D2 409 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 GTF2IRD2BQ6EKJ0 949 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 C3orf33Q6P1S2 294 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 C22orf34Q6ZV56 151 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 FCRLAQ7L513 359 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 GTF2IRD2Q86UP8 949 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 LSRQ86X29 649 aaPredicted RBP11.51□□□□□ -0.57
HDAC1-209ENST00000484305 CMIPQ8IY22 773 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 ZNF563Q8TA94 476 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 SLC38A5Q8WUX1 472 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 WDR60Q8WVS4 1066 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 OR5B2Q96R09 309 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 CCDC106Q9BWC9 280 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 SERINC1Q9NRX5 453 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 KLHL28Q9NXS3 571 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 CCDC167Q9P0B6 97 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 SLAMF8Q9P0V8 285 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 P2RX2Q9UBL9 471 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 NDRG3Q9UGV2 375 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 TESMINQ9Y4I5 508 aa11.51□□□□□ -0.57
HDAC1-209ENST00000484305 AKAP9Q99996 3911 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 UQCRHLA0A096LP55 91 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 C16orf97H3BN30 126 aa11.5□□□□□ -0.57
HDAC1-209ENST00000484305 CLIC1O00299 241 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms