RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-208	ENST00000475997	CCDC74B	Q96LY2	380 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	OR7D2	Q96RA2	312 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	RNF208	Q9H0X6	261 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	PTGES2	Q9H7Z7	377 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ACKR4	Q9NPB9	350 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	PURG	Q9UJV8	347 aa	Known RBP	5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ZFC3H1	O60293	1989 aa	Known RBP	5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	PPP5D1	E7EU14	171 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	CXCL14	O95715	111 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	C6orf47	O95873	294 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	EGF	P01133	1207 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ADRB1	P08588	477 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	LAMP1	P11279	417 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	SDC1	P18827	310 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	GIF	P27352	417 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	RBMS1	P29558	406 aa	Known RBP	5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	TNFSF8	P32971	234 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	DDOST	P39656	456 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	MC3R	P41968	323 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	LMAN2	Q12907	356 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	PLA2G7	Q13093	441 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	LRRC32	Q14392	662 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	RBMS2	Q15434	407 aa	Known RBP	5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ACTBL2	Q562R1	376 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	CCNJ	Q5T5M9	372 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	TPGS2	Q68CL5	300 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ADAM5	Q6NVV9	412 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	SPATC1	Q76KD6	591 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	FAM124A	Q86V42	546 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	FBXO15	Q8NCQ5	510 aa	Predicted RBP	5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	GPR26	Q8NDV2	337 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	GPR148	Q8TDV2	347 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	TSSK2	Q96PF2	358 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	TRIB3	Q96RU7	358 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	PKMYT1	Q99640	499 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	C17orf62	Q9BQA9	187 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	NKX6-2	Q9C056	277 aa	Predicted RBP	5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	OR51B5	Q9H339	312 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	METTL17	Q9H7H0	456 aa	Predicted RBP	5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ZNF586	Q9NXT0	402 aa		5.74	□□□□□ -1.49
HNRNPU-208	ENST00000475997	TUBAL3	A6NHL2	446 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	SRPX2	O60687	465 aa	Predicted RBP	5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	CLEC3A	O75596	197 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	KNG1	P01042	644 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	TNFRSF1B	P20333	461 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	PSMB1	P20618	241 aa	Known RBP	5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	KITLG	P21583	273 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	PRPH2	P23942	346 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	PAX6	P26367	422 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	NAA10	P41227	235 aa	Predicted RBP	5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	LCN6	P62502	163 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	RAB1A	P62820	205 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	CXADR	P78310	365 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	CCIN	Q13939	588 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	PXDC1	Q5TGL8	231 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	AWAT2	Q6E213	333 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	CNKSR3	Q6P9H4	555 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ZNF704	Q6ZNC4	412 aa	Predicted RBP	5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	P4HA3	Q7Z4N8	544 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	FAM129C	Q86XR2	697 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	GRAMD2A	Q8IUY3	354 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	SERPINA12	Q8IW75	414 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	OR4C5	Q8NGB2	326 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	OR13C3	Q8NGS6	347 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	PHOSPHO1	Q8TCT1	267 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ADAMTS16	Q8TE57	1224 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	C14orf79	Q96F83	325 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	LRRC46	Q96FV0	321 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	PDLIM5	Q96HC4	596 aa	Known RBP	5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	DEFB118	Q96PH6	123 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ZNF559	Q9BR84	538 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	IKZF5	Q9H5V7	419 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ERVMER34-1	Q9H9K5	563 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	LYRM2	Q9NU23	88 aa	Predicted RBP	5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	RNF186	Q9NXI6	227 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	IL37	Q9NZH6	218 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	RHCG	Q9UBD6	479 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	REV1	Q9UBZ9	1251 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	NDRG3	Q9UGV2	375 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	UGT2A1	Q9Y4X1	527 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	NIN	Q8N4C6	2090 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	NPIPB15	A6NHN6	443 aa	Predicted RBP	5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ARHGAP33	O14559	1287 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	CCL16	O15467	120 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	CIDEA	O60543	219 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	SOCS5	O75159	536 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ADAMTS4	O75173	837 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	LAP3	P28838	519 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	RPS13	P62277	151 aa	Known RBP	5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	H3F3A	P84243	136 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	CRYZ	Q08257	329 aa	Known RBP	5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	DOC2A	Q14183	400 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	FAM214A	Q32MH5	1076 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	LBH	Q53QV2	105 aa	Predicted RBP	5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ARSI	Q5FYB1	569 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	SLC18B1	Q6NT16	456 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	LRFN4	Q6PJG9	635 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	CD300LG	Q6UXG3	332 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	GDPD4	Q6W3E5	623 aa		5.73	□□□□□ -1.49
HNRNPU-208	ENST00000475997	SHF	Q7M4L6	423 aa		5.73	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms