RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 TRIM2Q9C040 744 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 SERINC1Q9NRX5 453 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 MAGED1Q9Y5V3 778 aaPredicted RBP20.18■□□□□ 0.82
USP42-205ENST00000465073 COL6A5A8TX70 2615 aa20.17■□□□□ 0.82
USP42-205ENST00000465073 SMAD9O15198 467 aaKnown RBP20.17■□□□□ 0.82
USP42-205ENST00000465073 STX11O75558 287 aa20.17■□□□□ 0.82
USP42-205ENST00000465073 C21orf58P58505 322 aa20.17■□□□□ 0.82
USP42-205ENST00000465073 DMTNQ08495 405 aa20.17■□□□□ 0.82
USP42-205ENST00000465073 ZNF141Q15928 474 aa20.17■□□□□ 0.82
USP42-205ENST00000465073 TIGD2Q4W5G0 525 aa20.17■□□□□ 0.82
USP42-205ENST00000465073 KBTBD8Q8NFY9 601 aa20.17■□□□□ 0.82
USP42-205ENST00000465073 TUBGCP3Q96CW5 907 aa20.17■□□□□ 0.82
USP42-205ENST00000465073 MUCL1Q96DR8 90 aa20.17■□□□□ 0.82
USP42-205ENST00000465073 PRSS50Q9UI38 385 aa20.17■□□□□ 0.82
USP42-205ENST00000465073 ZDHHC2Q9UIJ5 367 aa20.17■□□□□ 0.82
USP42-205ENST00000465073 SONP18583 2426 aaKnown RBP20.17■□□□□ 0.82
USP42-205ENST00000465073 NUP214P35658 2090 aaPredicted RBP20.16■□□□□ 0.82
USP42-205ENST00000465073 LYZL6O75951 148 aa20.16■□□□□ 0.82
USP42-205ENST00000465073 H6PDO95479 791 aa20.16■□□□□ 0.82
USP42-205ENST00000465073 THBS1P07996 1170 aa20.16■□□□□ 0.82
USP42-205ENST00000465073 MATN1P21941 496 aa20.16■□□□□ 0.82
USP42-205ENST00000465073 SOAT1P35610 550 aa20.16■□□□□ 0.82
USP42-205ENST00000465073 MAD2L1Q13257 205 aaPredicted RBP20.16■□□□□ 0.82
USP42-205ENST00000465073 SKP2Q13309 424 aa20.16■□□□□ 0.82
USP42-205ENST00000465073 PPA1Q15181 289 aa20.16■□□□□ 0.82
USP42-205ENST00000465073 GPR68Q15743 365 aa20.16■□□□□ 0.82
USP42-205ENST00000465073 PGGHGQ32M88 737 aa20.16■□□□□ 0.82
USP42-205ENST00000465073 C6orf120Q7Z4R8 191 aa20.16■□□□□ 0.82
USP42-205ENST00000465073 P2RY8Q86VZ1 359 aa20.16■□□□□ 0.82
USP42-205ENST00000465073 OR2W6PQ8NHA6 318 aa20.16■□□□□ 0.82
USP42-205ENST00000465073 TCP10LQ8TDR4 215 aa20.16■□□□□ 0.82
USP42-205ENST00000465073 TMEM234Q8WY98 164 aa20.16■□□□□ 0.82
USP42-205ENST00000465073 ZNF75CPQ92670 426 aaPredicted RBP20.16■□□□□ 0.82
USP42-205ENST00000465073 GRIP2Q9C0E4 1043 aa20.16■□□□□ 0.82
USP42-205ENST00000465073 QRSL1Q9H0R6 528 aaKnown RBP20.16■□□□□ 0.82
USP42-205ENST00000465073 SLCO5A1Q9H2Y9 848 aa20.16■□□□□ 0.82
USP42-205ENST00000465073 CADP27708 2225 aa20.15■□□□□ 0.82
USP42-205ENST00000465073 C9JVG2 144 aa20.15■□□□□ 0.82
USP42-205ENST00000465073 SPAG7O75391 227 aa20.15■□□□□ 0.82
USP42-205ENST00000465073 SKAP2O75563 359 aaPredicted RBP20.15■□□□□ 0.82
USP42-205ENST00000465073 CYP7B1O75881 506 aa20.15■□□□□ 0.82
USP42-205ENST00000465073 G6PDP11413 515 aa20.15■□□□□ 0.82
USP42-205ENST00000465073 ARRB2P32121 409 aa20.15■□□□□ 0.82
USP42-205ENST00000465073 CDKN1AP38936 164 aa20.15■□□□□ 0.82
USP42-205ENST00000465073 CLDN8P56748 225 aa20.15■□□□□ 0.82
USP42-205ENST00000465073 SESN3P58005 492 aa20.15■□□□□ 0.82
USP42-205ENST00000465073 RPS26P62854 115 aaKnown RBP20.15■□□□□ 0.82
USP42-205ENST00000465073 FAPQ12884 760 aa20.15■□□□□ 0.82
USP42-205ENST00000465073 STK11Q15831 433 aa20.15■□□□□ 0.82
USP42-205ENST00000465073 PGS1Q32NB8 556 aa20.15■□□□□ 0.82
USP42-205ENST00000465073 ARHGAP11BQ3KRB8 267 aa20.15■□□□□ 0.82
USP42-205ENST00000465073 TIMM23BQ5SRD1 257 aa20.15■□□□□ 0.82
USP42-205ENST00000465073 GALNT5Q7Z7M9 940 aa20.15■□□□□ 0.82
USP42-205ENST00000465073 ZNF100Q8IYN0 542 aa20.15■□□□□ 0.82
USP42-205ENST00000465073 MAPK1IP1LQ8NDC0 245 aa20.15■□□□□ 0.82
USP42-205ENST00000465073 ZNF775Q96BV0 537 aaPredicted RBP20.15■□□□□ 0.82
USP42-205ENST00000465073 ZNF300Q96RE9 604 aaPredicted RBP20.15■□□□□ 0.82
USP42-205ENST00000465073 LGALS13Q9UHV8 139 aa20.15■□□□□ 0.82
USP42-205ENST00000465073 KCNE5Q9UJ90 142 aa20.15■□□□□ 0.82
USP42-205ENST00000465073 FBN3Q75N90 2809 aa20.14■□□□□ 0.82
USP42-205ENST00000465073 FCMRO60667 390 aa20.14■□□□□ 0.81
USP42-205ENST00000465073 CSTAP01040 98 aa20.14■□□□□ 0.81
USP42-205ENST00000465073 PGCP20142 388 aa20.14■□□□□ 0.81
USP42-205ENST00000465073 ACVR1BP36896 505 aa20.14■□□□□ 0.81
USP42-205ENST00000465073 CSNK2A1P68400 391 aaPredicted RBP20.14■□□□□ 0.81
USP42-205ENST00000465073 EMX2Q04743 252 aa20.14■□□□□ 0.81
USP42-205ENST00000465073 TMPPEQ6ZT21 453 aa20.14■□□□□ 0.81
USP42-205ENST00000465073 EIF3MQ7L2H7 374 aaKnown RBP20.14■□□□□ 0.81
USP42-205ENST00000465073 SPATA3Q8NHX4 192 aa20.14■□□□□ 0.81
USP42-205ENST00000465073 SLC25A43Q8WUT9 341 aaPredicted RBP20.14■□□□□ 0.81
USP42-205ENST00000465073 TRAF4Q9BUZ4 470 aaPredicted RBP20.14■□□□□ 0.81
USP42-205ENST00000465073 SERHL2Q9H4I8 314 aa20.14■□□□□ 0.81
USP42-205ENST00000465073 ALG2Q9H553 416 aa20.14■□□□□ 0.81
USP42-205ENST00000465073 BARX1Q9HBU1 254 aaPredicted RBP20.14■□□□□ 0.81
USP42-205ENST00000465073 ACER3Q9NUN7 267 aa20.14■□□□□ 0.81
USP42-205ENST00000465073 FAIMQ9NVQ4 179 aa20.14■□□□□ 0.81
USP42-205ENST00000465073 CISD1Q9NZ45 108 aaKnown RBP20.14■□□□□ 0.81
USP42-205ENST00000465073 RAMP1O60894 148 aa20.13■□□□□ 0.81
USP42-205ENST00000465073 PGM3O95394 542 aa20.13■□□□□ 0.81
USP42-205ENST00000465073 IGHV4-39P01824 125 aa20.13■□□□□ 0.81
USP42-205ENST00000465073 TP53P04637 393 aaPredicted RBP20.13■□□□□ 0.81
USP42-205ENST00000465073 NUDT17P0C025 328 aa20.13■□□□□ 0.81
USP42-205ENST00000465073 GGT1P19440 569 aa20.13■□□□□ 0.81
USP42-205ENST00000465073 COX5AP20674 150 aa20.13■□□□□ 0.81
USP42-205ENST00000465073 IGHV1-2P23083 117 aa20.13■□□□□ 0.81
USP42-205ENST00000465073 DIO1P49895 249 aa20.13■□□□□ 0.81
USP42-205ENST00000465073 MERTKQ12866 999 aa20.13■□□□□ 0.81
USP42-205ENST00000465073 SMU1Q2TAY7 513 aa20.13■□□□□ 0.81
USP42-205ENST00000465073 CXXC5Q7LFL8 322 aaKnown RBP20.13■□□□□ 0.81
USP42-205ENST00000465073 DTX2Q86UW9 622 aa20.13■□□□□ 0.81
USP42-205ENST00000465073 OIT3Q8WWZ8 545 aa20.13■□□□□ 0.81
USP42-205ENST00000465073 ZNF350Q9GZX5 532 aa20.13■□□□□ 0.81
USP42-205ENST00000465073 EXD2Q9NVH0 621 aa20.13■□□□□ 0.81
USP42-205ENST00000465073 ASIC5Q9NY37 505 aa20.13■□□□□ 0.81
USP42-205ENST00000465073 NOP53Q9NZM5 478 aaKnown RBP20.13■□□□□ 0.81
USP42-205ENST00000465073 EMC3Q9P0I2 261 aa20.13■□□□□ 0.81
USP42-205ENST00000465073 MKLN1Q9UL63 735 aa20.13■□□□□ 0.81
USP42-205ENST00000465073 SHISA9B4DS77 424 aa20.12■□□□□ 0.81
USP42-205ENST00000465073 SULT2B1O00204 365 aa20.12■□□□□ 0.81
USP42-205ENST00000465073 UGT2B17O75795 530 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms