RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 OR2L8Q8NGY9 312 aa4.88□□□□□ -1.63
PTP4A1P1-201ENST00000420539 SMARCD2Q92925 531 aa4.88□□□□□ -1.63
PTP4A1P1-201ENST00000420539 SMIM10Q96HG1 83 aa4.88□□□□□ -1.63
PTP4A1P1-201ENST00000420539 RNF170Q96K19 258 aa4.88□□□□□ -1.63
PTP4A1P1-201ENST00000420539 SLC6A7Q99884 636 aa4.88□□□□□ -1.63
PTP4A1P1-201ENST00000420539 HSD17B14Q9BPX1 270 aa4.88□□□□□ -1.63
PTP4A1P1-201ENST00000420539 KRTAP4-2Q9BYR5 136 aa4.88□□□□□ -1.63
PTP4A1P1-201ENST00000420539 NXF5Q9H1B4 397 aaKnown RBP4.88□□□□□ -1.63
PTP4A1P1-201ENST00000420539 WDR54Q9H977 334 aa4.88□□□□□ -1.63
PTP4A1P1-201ENST00000420539 FOLH1BQ9HBA9 442 aa4.88□□□□□ -1.63
PTP4A1P1-201ENST00000420539 POPDC2Q9HBU9 364 aa4.88□□□□□ -1.63
PTP4A1P1-201ENST00000420539 ZC4H2Q9NQZ6 224 aa4.88□□□□□ -1.63
PTP4A1P1-201ENST00000420539 C8orf4Q9NR00 106 aa4.88□□□□□ -1.63
PTP4A1P1-201ENST00000420539 GPATCH2LQ9NWQ4 482 aa4.88□□□□□ -1.63
PTP4A1P1-201ENST00000420539 KLRF1Q9NZS2 232 aa4.88□□□□□ -1.63
PTP4A1P1-201ENST00000420539 WARS2Q9UGM6 360 aaKnown RBP4.88□□□□□ -1.63
PTP4A1P1-201ENST00000420539 C3orf18Q9UK00 162 aa4.88□□□□□ -1.63
PTP4A1P1-201ENST00000420539 NUP50Q9UKX7 468 aa4.88□□□□□ -1.63
PTP4A1P1-201ENST00000420539 STUB1Q9UNE7 303 aa4.88□□□□□ -1.63
PTP4A1P1-201ENST00000420539 PTPRCP08575 1304 aa4.88□□□□□ -1.63
PTP4A1P1-201ENST00000420539 ANKRD30AQ9BXX3 1397 aa4.88□□□□□ -1.63
PTP4A1P1-201ENST00000420539 JCADQ9P266 1359 aa4.88□□□□□ -1.63
PTP4A1P1-201ENST00000420539 OR5K3A6NET4 321 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 C15orf62A8K5M9 175 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 PROB1E7EW31 1015 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 G3V4G9 280 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 TIMM23O14925 209 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 CASKO14936 926 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 TFECO14948 347 aaPredicted RBP4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 RFPL2O75678 378 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 SC5DO75845 299 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 FARS2O95363 451 aaKnown RBP4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 LATS1O95835 1130 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 TSPAN13O95857 204 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 H2BFMP0C1H6 154 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 HTR2CP28335 458 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 KDELR2P33947 212 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 BDKRB1P46663 353 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 BRCC3P46736 316 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 GNPDA1P46926 289 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 TGM4P49221 684 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 SERPINB9P50453 376 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 SEC61BP60468 96 aaKnown RBP4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 IL9RQ01113 521 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 CYP24A1Q07973 514 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 ZNF169Q14929 603 aaPredicted RBP4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 SF3B4Q15427 424 aaKnown RBP eCLIP4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 TSC22D1Q15714 1073 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 ZNF77Q15935 545 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 SLC15A2Q16348 729 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 QRICH1Q2TAL8 776 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 KLHL38Q2WGJ6 581 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 FAM153CQ494X1 144 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 LRRC37A5PQ49AS3 106 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 SLC22A6Q4U2R8 563 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 BEND6Q5SZJ8 279 aaPredicted RBP4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 PLPP4Q5VZY2 271 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 TMPRSS11AQ6ZMR5 421 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 ZNF621Q6ZSS3 439 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 Q71RC1 249 aaPredicted RBP4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 CRLF3Q8IUI8 442 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 APRG1Q8IVJ8 170 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 FUNDC1Q8IVP5 155 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 LINC00518Q8N0U6 118 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 SPAG16Q8N0X2 631 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 TRAM1L1Q8N609 369 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 OR2AP1Q8NGE2 309 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 OR5L2Q8NGL0 311 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 OR1B1Q8NGR6 318 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 TEX47Q8TBZ9 253 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 LGALS14Q8TCE9 139 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 EME1Q96AY2 570 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 XPO6Q96QU8 1125 aaKnown RBP4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 GFM1Q96RP9 751 aaKnown RBP4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 DCTN5Q9BTE1 182 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 TRAF4Q9BUZ4 470 aaPredicted RBP4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 UPF3AQ9H1J1 476 aaKnown RBP4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 ALG9Q9H6U8 611 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 DCAF13Q9NV06 445 aaKnown RBP4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 FOXJ2Q9P0K8 574 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 IL36AQ9UHA7 158 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 ING1Q9UK53 422 aaPredicted RBP4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 FADS3Q9Y5Q0 445 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 CGNL1Q0VF96 1302 aa4.87□□□□□ -1.63
PTP4A1P1-201ENST00000420539 TRBV9A0A0B4J1U6 114 aa4.86□□□□□ -1.63
PTP4A1P1-201ENST00000420539 GOLGA6L9A6NEM1 432 aa4.86□□□□□ -1.63
PTP4A1P1-201ENST00000420539 CENPXA8MT69 81 aa4.86□□□□□ -1.63
PTP4A1P1-201ENST00000420539 LRRN3E7EW58 273 aa4.86□□□□□ -1.63
PTP4A1P1-201ENST00000420539 M0QXV9 152 aa4.86□□□□□ -1.63
PTP4A1P1-201ENST00000420539 INSIG1O15503 277 aa4.86□□□□□ -1.63
PTP4A1P1-201ENST00000420539 P2RX6O15547 441 aa4.86□□□□□ -1.63
PTP4A1P1-201ENST00000420539 AQP9O43315 295 aa4.86□□□□□ -1.63
PTP4A1P1-201ENST00000420539 B4GAT1O43505 415 aa4.86□□□□□ -1.63
PTP4A1P1-201ENST00000420539 SLC19A2O60779 497 aa4.86□□□□□ -1.63
PTP4A1P1-201ENST00000420539 RAMP2O60895 175 aa4.86□□□□□ -1.63
PTP4A1P1-201ENST00000420539 HSBP1O75506 76 aa4.86□□□□□ -1.63
PTP4A1P1-201ENST00000420539 ZMPSTE24O75844 475 aa4.86□□□□□ -1.63
PTP4A1P1-201ENST00000420539 CIAO1O76071 339 aa4.86□□□□□ -1.63
PTP4A1P1-201ENST00000420539 TOXO94900 526 aa4.86□□□□□ -1.63
PTP4A1P1-201ENST00000420539 ACTL6AO96019 429 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms