RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 NSDHLQ15738 373 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 OLIG3Q7RTU3 272 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 SCD5Q86SK9 330 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 GLCCI1Q86VQ1 547 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 CCDC71LQ8N9Z2 235 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 DIO2Q92813 273 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 CAPNS2Q96L46 248 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 NUDT22Q9BRQ3 303 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 CNTNAP3Q9BZ76 1288 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 RETREG1Q9H6L5 497 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 ZNF142P52746 1687 aaPredicted RBP11.29□□□□□ -0.6
UBR4-205ENST00000417040 RAB19A4D1S5 217 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 HSPB6O14558 160 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 LCATP04180 440 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 RD3LP0DJH9 198 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 RNH1P13489 461 aaKnown RBP11.29□□□□□ -0.6
UBR4-205ENST00000417040 OR1Q1Q15612 314 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 METAP1DQ6UB28 335 aaPredicted RBP11.29□□□□□ -0.6
UBR4-205ENST00000417040 ZNF100Q8IYN0 542 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 TMEFF1Q8IYR6 380 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 RBPMSQ93062 196 aaKnown RBP11.29□□□□□ -0.6
UBR4-205ENST00000417040 ARL5BQ96KC2 179 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 WDR92Q96MX6 357 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 NIPSNAP1Q9BPW8 284 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 C1QTNF2Q9BXJ5 285 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 ALOXE3Q9BYJ1 711 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 CNOT2Q9NZN8 540 aaKnown RBP11.29□□□□□ -0.6
UBR4-205ENST00000417040 CHD2O14647 1828 aaKnown RBP11.29□□□□□ -0.6
UBR4-205ENST00000417040 IL1AP01583 271 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 F13BP05160 661 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 DBHP09172 617 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 HRH2P25021 359 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 GDNFP39905 211 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 KIAA1024LP59773 190 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 RRAS2P62070 204 aaPredicted RBP11.29□□□□□ -0.6
UBR4-205ENST00000417040 ADARB1P78563 741 aaKnown RBP11.29□□□□□ -0.6
UBR4-205ENST00000417040 AAK1Q2M2I8 961 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 SOWAHCQ53LP3 525 aaPredicted RBP11.29□□□□□ -0.6
UBR4-205ENST00000417040 FRMPD2BQ6IN97 320 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 ZNF765Q7L2R6 523 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 LGALS14Q8TCE9 139 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 IL1F10Q8WWZ1 152 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 PKMYT1Q99640 499 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 PRR14Q9BWN1 585 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 PAPOLGQ9BWT3 736 aaKnown RBP11.29□□□□□ -0.6
UBR4-205ENST00000417040 PARP12Q9H0J9 701 aaKnown RBP11.29□□□□□ -0.6
UBR4-205ENST00000417040 GFOD1Q9NXC2 390 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 MED16Q9Y2X0 877 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 SNX11Q9Y5W9 270 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 A0A1B0GTW7 788 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 HSBP1L1C9JCN9 74 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 LIPAP38571 399 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 VIPR2P41587 438 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 ZNF140P52738 457 aaPredicted RBP11.29□□□□□ -0.6
UBR4-205ENST00000417040 CLDN10P78369 228 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 PGGHGQ32M88 737 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 COX20Q5RI15 118 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 SIAH3Q8IW03 269 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 CMIPQ8IY22 773 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 ZNF417Q8TAU3 575 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 GIMAP5Q96F15 307 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 FCRL1Q96LA6 429 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 DEFB126Q9BYW3 111 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 LMO7Q8WWI1 1683 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 B4GALT3O60512 393 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 PRKRAO75569 313 aaKnown RBP11.29□□□□□ -0.6
UBR4-205ENST00000417040 ITGB2P05107 769 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 CX3CR1P49238 355 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 TAS2R31P59538 309 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 SEC61A1P61619 476 aaKnown RBP11.29□□□□□ -0.6
UBR4-205ENST00000417040 SLC14A1Q13336 389 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 PDZD11Q5EBL8 140 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 Q6ZNX1 250 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 OR4M1Q8NGD0 313 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 SLC7A13Q8TCU3 470 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 ZDHHC12Q96GR4 267 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 ZNF582Q96NG8 517 aaPredicted RBP11.29□□□□□ -0.6
UBR4-205ENST00000417040 EHFQ9NZC4 300 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 GNG13Q9P2W3 67 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 PSORS1C1Q9UIG5 152 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 CDC14CA4D256 554 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 SURF4O15260 269 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 NFYAP23511 347 aaPredicted RBP11.28□□□□□ -0.6
UBR4-205ENST00000417040 THBS2P35442 1172 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 PRPS1P60891 318 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 HTR4Q13639 388 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 PRAMEF8Q5VWM4 474 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 PRAMEF7Q5VXH5 474 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 ZNF705AQ6ZN79 300 aaPredicted RBP11.28□□□□□ -0.6
UBR4-205ENST00000417040 SEC22CQ9BRL7 303 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 B3GNT2Q9NY97 397 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 ANKRD34BA5PLL1 514 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 ARNTLO00327 626 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 ZNF26P17031 533 aaPredicted RBP11.28□□□□□ -0.6
UBR4-205ENST00000417040 JUNDP17535 347 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 UBE2KP61086 200 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 SLX4IPQ5VYV7 408 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 LRRC46Q96FV0 321 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 TEX37Q96LM6 180 aa11.28□□□□□ -0.6
UBR4-205ENST00000417040 ZNF416Q9BWM5 594 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms