RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 PRKACGP22612 351 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 C11orf91Q3C1V1 193 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 ZNF791Q3KP31 576 aaPredicted RBP11.36□□□□□ -0.59
PCF11-201ENST00000298281 DPH7Q9BTV6 452 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 SLC19A3Q9BZV2 496 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 TINAGL1Q9GZM7 467 aaPredicted RBP11.36□□□□□ -0.59
PCF11-201ENST00000298281 NT5DC2Q9H857 520 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 PLSCR3Q9NRY6 295 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 B3GNT3Q9Y2A9 372 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 DUOX1Q9NRD9 1551 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 MSTNO14793 375 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 SRP14P37108 136 aaKnown RBP11.36□□□□□ -0.59
PCF11-201ENST00000298281 CNN3Q15417 329 aaKnown RBP11.36□□□□□ -0.59
PCF11-201ENST00000298281 AADACL3Q5VUY0 350 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 TECPR1Q7Z6L1 1165 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 ISOC1Q96CN7 298 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 FBXL20Q96IG2 436 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 MTHFD2LQ9H903 347 aaPredicted RBP11.36□□□□□ -0.59
PCF11-201ENST00000298281 A0A0D9SEW6 157 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 UPP1Q16831 310 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 OR8U1Q8NH10 309 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 ZNF845Q96IR2 970 aaPredicted RBP11.36□□□□□ -0.59
PCF11-201ENST00000298281 OCSTAMPQ9BR26 566 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 KCTD3Q9Y597 815 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 PMS2P1A4D2B8 440 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 EDN1P05305 212 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 NFYBP25208 207 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 ETV3P41162 512 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 ZNF468Q5VIY5 522 aaPredicted RBP11.36□□□□□ -0.59
PCF11-201ENST00000298281 ENPP6Q6UWR7 440 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 PQLC3Q8N755 202 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 FNDC9Q8TBE3 224 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 HYLS1Q96M11 299 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 WRAP73Q9P2S5 460 aaPredicted RBP11.36□□□□□ -0.59
PCF11-201ENST00000298281 BET1O15155 118 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 RAD1O60671 282 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 IL7P13232 177 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 CD1DP15813 335 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 EVI2BP34910 448 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 RABIFP47224 123 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 PPT1P50897 306 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 DAP3P51398 398 aaKnown RBP11.36□□□□□ -0.59
PCF11-201ENST00000298281 MEF2AQ02078 507 aaPredicted RBP11.36□□□□□ -0.59
PCF11-201ENST00000298281 GK2Q14410 553 aaPredicted RBP11.36□□□□□ -0.59
PCF11-201ENST00000298281 SSX7Q7RTT5 188 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 ZNF761Q86XN6 746 aaPredicted RBP11.36□□□□□ -0.59
PCF11-201ENST00000298281 SLC5A8Q8N695 610 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 FAM46AQ96IP4 442 aaKnown RBP11.36□□□□□ -0.59
PCF11-201ENST00000298281 BCL7BQ9BQE9 202 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 CPNE5Q9HCH3 593 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 GNG12Q9UBI6 72 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 PRAMEF2O60811 474 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 PENKP01210 267 aaPredicted RBP11.36□□□□□ -0.59
PCF11-201ENST00000298281 MBP02144 154 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 ITGB2P05107 769 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 PPP2CBP62714 309 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 MKXQ8IYA7 352 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 UHRF1Q96T88 793 aaPredicted RBP11.36□□□□□ -0.59
PCF11-201ENST00000298281 GPN2Q9H9Y4 310 aaPredicted RBP11.36□□□□□ -0.59
PCF11-201ENST00000298281 VDAC3Q9Y277 283 aa11.36□□□□□ -0.59
PCF11-201ENST00000298281 PRAMEF27A3QJZ7 478 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 PCDH17O14917 1159 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 PRPS1P60891 318 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 LMAN2Q12907 356 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 ZNF74Q16587 644 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 PRAMEF9Q5VWM5 478 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 OR4C11Q6IEV9 310 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 OR10X1Q8NGY0 326 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 ZFAND2BQ8WV99 257 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 ANKRD9Q96BM1 317 aaPredicted RBP11.35□□□□□ -0.59
PCF11-201ENST00000298281 OR2B2Q9GZK3 357 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 SORBS2O94875 1100 aaKnown RBP11.35□□□□□ -0.59
PCF11-201ENST00000298281 SLC6A8P48029 635 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 TGM4P49221 684 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 MUS81Q96NY9 551 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 A0A1W2PQU0 124 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 AGTR2P50052 363 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 SGSHP51688 502 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 RNLSQ5VYX0 342 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 ZNF585AQ6P3V2 769 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 COMMD7Q86VX2 200 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 OR5D14Q8NGL3 314 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 ABCG5Q9H222 651 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 LOC102723971A0A1B0GUV8 181 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 CIDEAO60543 219 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 PEX10O60683 326 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 HOXD12P35452 270 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 TAS2R38P59533 333 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 OR7A5Q15622 319 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 MEP1BQ16820 701 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 SLC22A25Q6T423 547 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 SFXN5Q8TD22 340 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 SULT2B1O00204 365 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 ZNF623O75123 536 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 MMP2P08253 660 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 UBL4AP11441 157 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 RAB3AP20336 220 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 NTSR1P30989 418 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 LAPTM4AQ15012 233 aa11.35□□□□□ -0.59
PCF11-201ENST00000298281 MSS51Q4VC12 460 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms