RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 SLC6A15Q9H2J7 730 aa15.58■□□□□ 0.08
PHRF1-201ENST00000264555 ZNF225Q9UK10 706 aa15.58■□□□□ 0.08
PHRF1-201ENST00000264555 GABRPO00591 440 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 SLC35A2P78381 396 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 MMP21Q8N119 569 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 ZNF615Q8N8J6 731 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 HOXB13Q92826 284 aaPredicted RBP15.57■□□□□ 0.08
PHRF1-201ENST00000264555 ZNF576Q9H609 170 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 RLIMQ9NVW2 624 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 A0A1W2PR48 441 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 GJE1A6NN92 205 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 BCAT2O15382 392 aaPredicted RBP15.57■□□□□ 0.08
PHRF1-201ENST00000264555 CTNSO60931 367 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 LGI1O95970 557 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 PRH1P02810 166 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 PSMB10P40306 273 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 CDNFQ49AH0 187 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 KIAA1211LQ6NV74 962 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 TMEM205Q6UW68 189 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 UBE2FQ969M7 185 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 TAS2R16Q9NYV7 291 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 SLC7A11Q9UPY5 501 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 VDAC3Q9Y277 283 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 HPGDSO60760 199 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 MAGEA2P43356 314 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 GARNL3Q5VVW2 1013 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 RABEPKQ7Z6M1 372 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 HPF1Q9NWY4 346 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 SLC23A2Q9UGH3 650 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 KIF13BQ9NQT8 1826 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 H3BML4 177 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 HSD11B2P80365 405 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 KCTD20Q7Z5Y7 419 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 NAXEQ8NCW5 288 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 ZNF419Q96HQ0 510 aaPredicted RBP15.57■□□□□ 0.08
PHRF1-201ENST00000264555 OR5M11Q96RB7 305 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 THAP7Q9BT49 309 aaPredicted RBP15.57■□□□□ 0.08
PHRF1-201ENST00000264555 VN1R3Q9BXE9 311 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 MGAT4CQ9UBM8 478 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 RASD1Q9Y272 281 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 SNX11Q9Y5W9 270 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 TEX13CA0A0J9YWL9 993 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 S100A9P06702 114 aaKnown RBP15.57■□□□□ 0.08
PHRF1-201ENST00000264555 MMP11P24347 488 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 PCSK6P29122 969 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 SSTR4P31391 388 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 EEF1A1P5Q5VTE0 462 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 TMEM255BQ8WV15 326 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 CENPOQ9BU64 300 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 GABARAPL3Q9BY60 117 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 ICKQ9UPZ9 632 aa15.57■□□□□ 0.08
PHRF1-201ENST00000264555 SMAD9O15198 467 aaKnown RBP15.56■□□□□ 0.08
PHRF1-201ENST00000264555 BMP4P12644 408 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 CTU2Q2VPK5 515 aaKnown RBP15.56■□□□□ 0.08
PHRF1-201ENST00000264555 STACQ99469 402 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 MMP28Q9H239 520 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 DAPP1Q9UN19 280 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 BRWD3Q6RI45 1802 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 BSGP35613 385 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 PUDPQ08623 228 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 CHRFAM7AQ494W8 412 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 PRICKLE2Q7Z3G6 844 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 LRRC28Q86X40 367 aaPredicted RBP15.56■□□□□ 0.08
PHRF1-201ENST00000264555 PTOV1Q86YD1 416 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 SPHK1Q9NYA1 384 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 CPNE6O95741 557 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 HTR1FP30939 366 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 FXYD6P3P58550 94 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 RPL22L1Q6P5R6 122 aaKnown RBP15.56■□□□□ 0.08
PHRF1-201ENST00000264555 ZNF565Q8N9K5 539 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 LSM14AQ8ND56 463 aaKnown RBP15.56■□□□□ 0.08
PHRF1-201ENST00000264555 SLC7A13Q8TCU3 470 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 NAT6Q93015 286 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 TNFRSF13CQ96RJ3 184 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 CACNG2Q9Y698 323 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 A0A1W2PQ09 198 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 POM121BA6NF01 834 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 SYT7O43581 403 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 S100A10P60903 97 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 MLF2Q15773 248 aaPredicted RBP15.56■□□□□ 0.08
PHRF1-201ENST00000264555 OLIG3Q7RTU3 272 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 RBM45Q8IUH3 476 aaKnown RBP15.56■□□□□ 0.08
PHRF1-201ENST00000264555 UBQLNLQ8IYU4 475 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 ADAMTS14Q8WXS8 1223 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 HYLS1Q96M11 299 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 OR10A4Q9H209 315 aa15.56■□□□□ 0.08
PHRF1-201ENST00000264555 TRAV18A0A075B6X5 111 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 TVP23AA6NH52 213 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 LIPAP38571 399 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 MRPS10P82664 201 aaKnown RBP15.55■□□□□ 0.08
PHRF1-201ENST00000264555 OR7A5Q15622 319 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 NKAPLQ5M9Q1 402 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 RNF165Q6ZSG1 346 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 TIGD4Q8IY51 512 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 GPR137CQ8N3F9 429 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.55■□□□□ 0.081e-7■□□□□ 10.4
PHRF1-201ENST00000264555 A0A1B0GWA3 101 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 OR5K3A6NET4 321 aa15.55■□□□□ 0.08
PHRF1-201ENST00000264555 CSO75390 466 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms