RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 VDAC3Q9Y277 283 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 LIPGQ9Y5X9 500 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 NCKAP5O14513 1909 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 HEATR5AQ86XA9 2040 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 TRGV5A0A0B4J1U4 118 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 M0R3H8 397 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 TRAPPC6AO75865 159 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 PRKD3O94806 890 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 STAMBPO95630 424 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 ZNF682O95780 498 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 NUDT14O95848 222 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 HOXB6P17509 224 aaKnown RBP12.76□□□□□ -0.37
VPS25-201ENST00000253794 RYKP34925 604 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 APOBEC1P41238 236 aaKnown RBP12.76□□□□□ -0.37
VPS25-201ENST00000253794 IDH2P48735 452 aaKnown RBP12.76□□□□□ -0.37
VPS25-201ENST00000253794 MLLT10P55197 1068 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 COPZ1P61923 177 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 FOXF1Q12946 379 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 FLOT2Q14254 428 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 BCL2A1Q16548 175 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 IQCCQ4KMZ1 466 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 WIPI1Q5MNZ9 446 aaPredicted RBP12.76□□□□□ -0.37
VPS25-201ENST00000253794 SWT1Q5T5J6 900 aaKnown RBP12.76□□□□□ -0.37
VPS25-201ENST00000253794 ZNF613Q6PF04 617 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 CYP2R1Q6VVX0 501 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 PLEKHM3Q6ZWE6 761 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 RBM45Q8IUH3 476 aaKnown RBP12.76□□□□□ -0.37
VPS25-201ENST00000253794 SPPL2CQ8IUH8 684 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 FAM86B1Q8N7N1 296 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 ST6GALNAC3Q8NDV1 305 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 TPD52L3Q96J77 140 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 C7orf34Q96L11 122 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 SLC6A15Q9H2J7 730 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 MAGIXQ9H6Y5 334 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 SH3GLB1Q9Y371 365 aa12.76□□□□□ -0.37
VPS25-201ENST00000253794 A0A0B4J2E0 115 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 A0A1B0GX12 115 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 TCRBV3S1A0A5B6 114 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 GMFGO60234 142 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 SEMA7AO75326 666 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 IFNW1P05000 195 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 THRBP10828 461 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 UMPSP11172 480 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 GP1BBP13224 206 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 TNFRSF1BP20333 461 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 FKBP2P26885 142 aaKnown RBP12.75□□□□□ -0.37
VPS25-201ENST00000253794 GCKP35557 465 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 MAGEA2P43356 314 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 FOXK1P85037 733 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 HOXC5Q00444 222 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 CRYZQ08257 329 aaKnown RBP12.75□□□□□ -0.37
VPS25-201ENST00000253794 RAET1LQ5VY80 246 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 AAGABQ6PD74 315 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 ENPP6Q6UWR7 440 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 FGD2Q7Z6J4 655 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 TSEN54Q7Z6J9 526 aaKnown RBP12.75□□□□□ -0.37
VPS25-201ENST00000253794 OR10Q1Q8NGQ4 319 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 ZNF563Q8TA94 476 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 DNAJA4Q8WW22 397 aaPredicted RBP12.75□□□□□ -0.37
VPS25-201ENST00000253794 MIB2Q96AX9 1013 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 C3orf49Q96BT1 292 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 SFXN2Q96NB2 322 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 MCHR1Q99705 422 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 NPAS1Q99742 590 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 UGT2B28Q9BY64 529 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 PRDM14Q9GZV8 571 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 TSPAN10Q9H1Z9 355 aaPredicted RBP12.75□□□□□ -0.37
VPS25-201ENST00000253794 PCNX3Q9H6A9 2034 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 SPRR3Q9UBC9 169 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 ACAD8Q9UKU7 415 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 AP4B1Q9Y6B7 739 aa12.75□□□□□ -0.37
VPS25-201ENST00000253794 SHANK1Q9Y566 2161 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 A0A1B0GWA3 101 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 EFNA2O43921 213 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 PRSS23O95084 383 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 OR5F1O95221 314 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 LYPD3O95274 346 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 WISP1O95388 367 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 PRB1P04280 392 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 GPIP06744 558 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 CPN1P15169 458 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 BMP7P18075 431 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 OR1E2P47887 323 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 LHX2P50458 406 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 POLR2HP52434 150 aaKnown RBP12.74□□□□□ -0.37
VPS25-201ENST00000253794 RAC1P63000 192 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 SELENBP1Q13228 472 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 TOMM20Q15388 145 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 OR1Q1Q15612 314 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 ENTPD8Q5MY95 495 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 ULK3Q6PHR2 472 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 FKBP9P1Q75LS8 142 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 PIWIL3Q7Z3Z3 882 aaKnown RBP12.74□□□□□ -0.37
VPS25-201ENST00000253794 ATG4DQ86TL0 474 aaPredicted RBP12.74□□□□□ -0.37
VPS25-201ENST00000253794 TSPYL5Q86VY4 417 aaPredicted RBP12.74□□□□□ -0.37
VPS25-201ENST00000253794 ADGRG3Q86Y34 549 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 VANGL1Q8TAA9 524 aaPredicted RBP12.74□□□□□ -0.37
VPS25-201ENST00000253794 SLC38A4Q969I6 547 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 SARAFQ96BY9 339 aa12.74□□□□□ -0.37
VPS25-201ENST00000253794 LRGUKQ96M69 825 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms