RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Cd320Q9Z1P5 260 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Isl1P61372 349 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Dsg1cQ7TSF0 911 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Gtpbp8Q9CY28 285 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Ceacam20Q9D2Z1 577 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Sema4gQ9WUH7 837 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Gm14085A2AWR5 660 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Olfr1095A3KPP7 308 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Slc22a28B2RT89 552 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 S100a11P50543 98 aaKnown RBP14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 FcrlbQ5DRQ8 427 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 MuskQ61006 868 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Ltbp3Q61810 1268 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Cr1lQ64735 483 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Shc4Q6S5L9 626 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Olfr290Q7TS13 315 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Q80Y39 304 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Adipor2Q8BQS5 386 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Pithd1Q8BWR2 211 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 MastlQ8C0P0 865 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Cdc42ep1Q91W92 409 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Slc22a30Q96LX3 552 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Tcf19Q99KJ5 263 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Slc25a46Q9CQS4 418 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Zfp937A2ANU7 503 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Gm7233E9PZI8 198 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Gm9732F6QVC4 198 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Gm8104K7N744 198 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Olfr1249L7MU51 318 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Vmn2r13L7N1X2 831 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Prdx4O08807 274 aaKnown RBP14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Cdh10P70408 788 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Mier2Q3U3N0 541 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Rpa2Q62193 270 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Mapk3Q63844 380 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Carns1Q6ZPS2 827 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Tm7sf2Q71KT5 418 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Eif4e2Q8BMB3 245 aaKnown RBP14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Tmem106aQ8VC04 261 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Olfr350Q8VFP8 312 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Ccdc167Q9D162 97 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Ing5Q9D8Y8 240 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 PmpcaQ9DC61 524 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 PrkraQ9WTX2 313 aaKnown RBP14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Igkv12-46A0A140T8P6 115 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Tomm5B1AXP6 51 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Cd83O88324 196 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 P03987 398 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Ctbp2P56546 445 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 McidasQ3UZ45 379 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Fam71f1Q3UZD7 341 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Ppp1r3bQ8C767 284 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Psg23Q9D2U0 471 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Cir1Q9DA19 450 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Psg21Q9DAV5 471 aa14.6□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 D3Ertd254eA0A0G2JEM5 796 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Skint4A7TZF3 474 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Vmn2r109K7N747 858 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Cst3P21460 140 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 SctQ08535 133 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 B3gnt4Q1RLK6 350 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Pamr1Q8BU25 720 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 SdslQ8R238 329 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Ugt2b37Q8VCN3 530 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Dhrs7Q9CXR1 338 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Olfr955Q9EQ97 314 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 TsnaxQ9QZE7 290 aaKnown RBP14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Gm3952A0A0A6YXJ1 191 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Olfr1221L7MU53 311 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Ifi204P0DOV2 619 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 PdxpP60487 292 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Actc1P68033 377 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Acta1P68134 377 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Olfr161Q8VGB9 313 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Hdac8Q8VH37 377 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 TipinQ91WA1 278 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Aaed1Q9D1A0 226 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Adat1Q9JHI2 499 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Sec61a2Q9JLR1 476 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Igkv5-39A0A0G2JDV4 115 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Tmem240B2RWJ3 173 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 EmdO08579 259 aaKnown RBP14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Sox1P53783 391 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 RimklaQ6PFX8 380 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Kiaa0895lQ810A5 467 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Tmem221Q8K071 230 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Olfr1312Q8VF10 317 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Dus3lQ91XI1 637 aaKnown RBP14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Hint3Q9CPS6 165 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Rhox2aQ9D4Y3 191 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Ift43Q9DA69 206 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Rbbp9O88851 186 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Cd28P31041 218 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Tmem69Q3KQJ0 245 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Tmem253Q3UNB8 204 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 B3gnt6Q3USF0 391 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 HhipQ7TN16 700 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Olfr1161Q7TR29 321 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 RbksQ8R1Q9 323 aa14.59□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Olfr569Q8VGZ2 314 aa14.59□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms