RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 FBLIM1Q8WUP2 373 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 TCEAL4Q96EI5 215 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 SFXN2Q96NB2 322 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 ARHGAP9Q9BRR9 750 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 MIXL1Q9H2W2 232 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 IFT46Q9NQC8 304 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 DNMT3BQ9UBC3 853 aaKnown RBP9.83□□□□□ -0.84
USB1-212ENST00000566082 PCM1Q15154 2024 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 WASH3PC4AMC7 463 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 MAGEB4O15481 346 aaPredicted RBP9.83□□□□□ -0.84
USB1-212ENST00000566082 PRAF2O60831 178 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 B4GALT2O60909 372 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 ZNF432O94892 652 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 RENP00797 406 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 EIF4EP06730 217 aaKnown RBP9.83□□□□□ -0.84
USB1-212ENST00000566082 POLR2CP19387 275 aaPredicted RBP9.83□□□□□ -0.84
USB1-212ENST00000566082 MAPK3P27361 379 aaPredicted RBP9.83□□□□□ -0.84
USB1-212ENST00000566082 TEAD1P28347 426 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 BRIX1Q8TDN6 353 aaKnown RBP9.83□□□□□ -0.84
USB1-212ENST00000566082 HCAR2Q8TDS4 363 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 FCRL1Q96LA6 429 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 LYSMD1Q96S90 227 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 ATF6BQ99941 703 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 SYNDIG1Q9H7V2 258 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 ISG20L2Q9H9L3 353 aaKnown RBP9.83□□□□□ -0.84
USB1-212ENST00000566082 SIDT1Q9NXL6 827 aaKnown RBP9.83□□□□□ -0.84
USB1-212ENST00000566082 POLR2AP24928 1970 aaKnown RBP9.83□□□□□ -0.84
USB1-212ENST00000566082 F5P12259 2224 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 PPM1DO15297 605 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 DPM1O60762 260 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 AIFM1O95831 613 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 SYN1P17600 705 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 ERVK-25P63136 954 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 DHCR24Q15392 516 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 C12orf73Q69YU5 71 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 TMEM17Q86X19 198 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 OR2L2Q8NH16 312 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 SYNPRQ8TBG9 265 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 BCL7CQ8WUZ0 217 aaPredicted RBP9.83□□□□□ -0.84
USB1-212ENST00000566082 OR14A2Q96R54 314 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 LMF1Q96S06 567 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 S100A13Q99584 98 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 OR2S2Q9NQN1 319 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 PCDHB16Q9NRJ7 776 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 CENPMQ9NSP4 180 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 ABRACLQ9P1F3 81 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 MYEF2Q9P2K5 600 aaKnown RBP9.83□□□□□ -0.84
USB1-212ENST00000566082 RBBP6Q7Z6E9 1792 aaKnown RBP9.83□□□□□ -0.84
USB1-212ENST00000566082 SIX6O95475 246 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 LGI1O95970 557 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 SOD1P00441 154 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 TP53P04637 393 aaPredicted RBP9.82□□□□□ -0.84
USB1-212ENST00000566082 DBIP07108 87 aaKnown RBP9.82□□□□□ -0.84
USB1-212ENST00000566082 LIPCP11150 499 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 HTR4Q13639 388 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 FAM122CQ6P4D5 195 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 ASPGQ86U10 573 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 OR13C5Q8NGS8 318 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 CHAC2Q8WUX2 184 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 GCDHQ92947 438 aaPredicted RBP9.82□□□□□ -0.84
USB1-212ENST00000566082 GPER1Q99527 375 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 FLVCR2Q9UPI3 526 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 ATG4BQ9Y4P1 393 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 CARNS1A5YM72 827 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 F5H5P2 479 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 CLEC3AO75596 197 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 SC5DO75845 299 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 NFYAP23511 347 aaPredicted RBP9.82□□□□□ -0.84
USB1-212ENST00000566082 DLX5P56178 289 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 POU4F2Q12837 409 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 IRF3Q14653 427 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 BEX5Q5H9J7 111 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 FAM69AQ5T7M9 428 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 HENMT1Q5T8I9 393 aaKnown RBP9.82□□□□□ -0.84
USB1-212ENST00000566082 TEX261Q6UWH6 196 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 IDO2Q6ZQW0 420 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 ABHD13Q7L211 337 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 TAF8Q7Z7C8 310 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 PRSS58Q8IYP2 241 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 SLC38A6Q8IZM9 456 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 ZNF615Q8N8J6 731 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 CAMKVQ8NCB2 501 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 SLC16A11Q8NCK7 471 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 PHOSPHO1Q8TCT1 267 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 SLC22A18Q96BI1 424 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 MSLNLQ96KJ4 702 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 MS4A4EQ96PG1 132 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 TRIM2Q9C040 744 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 SLC35A3Q9Y2D2 325 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 U3KQ87 197 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 CLDN4O14493 209 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 KIAA0355O15063 1070 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 CYB5AP00167 134 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 CSTAP01040 98 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 CHRM4P08173 479 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 IL32P24001 234 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 PSMA3P25788 255 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 VIPR2P41587 438 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 RBM34P42696 430 aaKnown RBP9.82□□□□□ -0.84
USB1-212ENST00000566082 ARHGDIBP52566 201 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms