RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 SOX14O95416 240 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 PNMTP11086 282 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 ITIH1P19827 911 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 FMO3P31513 532 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 ETV5P41161 510 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 GIPRP48546 466 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 TMED10P49755 219 aaKnown RBP12.65□□□□□ -0.38
TPM1-215ENST00000558868 CTBP2P56545 445 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 SKP2Q13309 424 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 TRIP6Q15654 476 aaKnown RBP12.65□□□□□ -0.38
TPM1-215ENST00000558868 NADK2Q4G0N4 442 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 ALG10BQ5I7T1 473 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 WBP2NLQ6ICG8 309 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 LAIR2Q6ISS4 152 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 FAM199XQ6PEV8 388 aaPredicted RBP12.65□□□□□ -0.38
TPM1-215ENST00000558868 PIP4P1Q86T03 277 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 SLC43A2Q8N370 569 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 CADM2Q8N3J6 435 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 SLC15A4Q8N697 577 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 SLC22A8Q8TCC7 542 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 GRHL3Q8TE85 626 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 MYDGFQ969H8 173 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 TMCO6Q96DC7 493 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 SLC38A2Q96QD8 506 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 NODALQ96S42 347 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 TUBA1CQ9BQE3 449 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 DUSP21Q9H596 190 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 AKIRIN1Q9H9L7 192 aaPredicted RBP12.65□□□□□ -0.38
TPM1-215ENST00000558868 ZNF226Q9NYT6 803 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 FLRT3Q9NZU0 649 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 ZNF223Q9UK11 482 aaPredicted RBP12.65□□□□□ -0.38
TPM1-215ENST00000558868 COL27A1Q8IZC6 1860 aaPredicted RBP12.65□□□□□ -0.38
TPM1-215ENST00000558868 PTGES3LE9PB15 166 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 NDUFB5O43674 189 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 PRKNO60260 465 aaPredicted RBP12.64□□□□□ -0.39
TPM1-215ENST00000558868 WBP4O75554 376 aaKnown RBP12.64□□□□□ -0.39
TPM1-215ENST00000558868 RCBTB2O95199 551 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 DLGAP3O95886 979 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 TP53P04637 393 aaPredicted RBP12.64□□□□□ -0.39
TPM1-215ENST00000558868 IFI30P13284 250 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 JUNBP17275 347 aaPredicted RBP12.64□□□□□ -0.39
TPM1-215ENST00000558868 GABRB1P18505 474 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 FOXL2P58012 376 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 CDK5Q00535 292 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 GINS1Q14691 196 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 TMEM236Q5W0B7 351 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 SLC27A4Q6P1M0 643 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 BORAQ6PGQ7 559 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 KCTD8Q6ZWB6 473 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 TMPRSS11FQ6ZWK6 438 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 NUP54Q7Z3B4 507 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 GPR141Q7Z602 305 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 SATL1Q86VE3 508 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 CYP4Z2PQ8N1L4 340 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 SVOPQ8N4V2 548 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 TMCO5AQ8N6Q1 288 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 POGLUT1Q8NBL1 392 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 ZNF540Q8NDQ6 660 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 OR8J1Q8NGP2 316 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 M1APQ8TC57 530 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 APH1BQ8WW43 257 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 TTC9Q92623 222 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 PMEPA1Q969W9 287 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 GPA33Q99795 319 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 POLDIP3Q9BY77 421 aaKnown RBP12.64□□□□□ -0.39
TPM1-215ENST00000558868 DEFB126Q9BYW3 111 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 SLC19A3Q9BZV2 496 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 B3GNT4Q9C0J1 378 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 C12orf10Q9HB07 376 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 CNIH4Q9P003 139 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 CDH10Q9Y6N8 788 aa12.64□□□□□ -0.39
TPM1-215ENST00000558868 WDR87Q6ZQQ6 2873 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 IGHV1-45A0A0A0MS14 117 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 A0A1W2PQ72 361 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 RGS10O43665 173 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 XPNPEP2O43895 674 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 PIP5K1CO60331 668 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 FADS1O60427 444 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 KLF7O75840 302 aaPredicted RBP12.63□□□□□ -0.39
TPM1-215ENST00000558868 HMGN1P05114 100 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 UMODP07911 640 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 PGCP20142 388 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 GPR4P46093 362 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 PCYT1AP49585 367 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 CCR4P51679 360 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 SLC35A2P78381 396 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 MVKQ03426 396 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 PCOLCEQ15113 449 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 CD226Q15762 336 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 TMEM44Q2T9K0 475 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 ZBED5Q49AG3 693 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 TMEM201Q5SNT2 666 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 SLC25A30Q5SVS4 291 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 STPG1Q5TH74 334 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 MEDAGQ5VYS4 303 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 KIRREL2Q6UWL6 708 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 LINC00114Q6XXX2 140 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 NLGN4XQ8N0W4 816 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 SPARTQ8N0X7 666 aa12.63□□□□□ -0.39
TPM1-215ENST00000558868 ESX1Q8N693 406 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms