RNA–Protein interactions for RNA: ENST00000519177.5

SNTB1-203, Transcript of syntrophin beta 1, humanhuman

TSL 1 (best)

Gene SNTB1, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-203ENST00000519177 OR4C3Q8NH37 302 aa17.19■□□□□ 0.34
SNTB1-203ENST00000519177 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.19■□□□□ 0.34
SNTB1-203ENST00000519177 SLC46A1Q96NT5 459 aa17.19■□□□□ 0.34
SNTB1-203ENST00000519177 ASPNQ9BXN1 380 aa17.19■□□□□ 0.34
SNTB1-203ENST00000519177 GALNT8Q9NY28 637 aa17.19■□□□□ 0.34
SNTB1-203ENST00000519177 SPIN1Q9Y657 262 aaPredicted RBP17.19■□□□□ 0.34
SNTB1-203ENST00000519177 FAM86C2PA6NEL3 165 aa17.18■□□□□ 0.34
SNTB1-203ENST00000519177 ZNF670-ZNF695F2Z2N8 137 aa17.18■□□□□ 0.34
SNTB1-203ENST00000519177 CSTAP01040 98 aa17.18■□□□□ 0.34
SNTB1-203ENST00000519177 TSPAN19P0C672 248 aa17.18■□□□□ 0.34
SNTB1-203ENST00000519177 FOLR1P15328 257 aa17.18■□□□□ 0.34
SNTB1-203ENST00000519177 SHBQ15464 509 aa17.18■□□□□ 0.34
SNTB1-203ENST00000519177 KLHL26Q53HC5 615 aa17.18■□□□□ 0.34
SNTB1-203ENST00000519177 KIRREL2Q6UWL6 708 aa17.18■□□□□ 0.34
SNTB1-203ENST00000519177 THSD4Q6ZMP0 1018 aa17.18■□□□□ 0.34
SNTB1-203ENST00000519177 LAPTM4BQ86VI4 370 aa17.18■□□□□ 0.34
SNTB1-203ENST00000519177 PSD4Q8NDX1 1056 aa17.18■□□□□ 0.34
SNTB1-203ENST00000519177 OR4F15Q8NGB8 312 aa17.18■□□□□ 0.34
SNTB1-203ENST00000519177 TM9SF4Q92544 642 aa17.18■□□□□ 0.34
SNTB1-203ENST00000519177 ARHGAP9Q9BRR9 750 aa17.18■□□□□ 0.34
SNTB1-203ENST00000519177 IER2Q9BTL4 223 aa17.18■□□□□ 0.34
SNTB1-203ENST00000519177 NDC1Q9BTX1 674 aa17.18■□□□□ 0.34
SNTB1-203ENST00000519177 HOXD1Q9GZZ0 328 aa17.18■□□□□ 0.34
SNTB1-203ENST00000519177 CMC2Q9NRP2 79 aa17.18■□□□□ 0.34
SNTB1-203ENST00000519177 PNO1Q9NRX1 252 aaKnown RBP17.18■□□□□ 0.34
SNTB1-203ENST00000519177 ETAA1Q9NY74 926 aa17.18■□□□□ 0.34
SNTB1-203ENST00000519177 RPS6KB2Q9UBS0 482 aa17.18■□□□□ 0.34
SNTB1-203ENST00000519177 BAIAP2Q9UQB8 552 aa17.18■□□□□ 0.34
SNTB1-203ENST00000519177 SLC35A3Q9Y2D2 325 aa17.18■□□□□ 0.34
SNTB1-203ENST00000519177 PEX16Q9Y5Y5 336 aa17.18■□□□□ 0.34
SNTB1-203ENST00000519177 SOCS6O14544 535 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 POLR1CO15160 346 aaPredicted RBP17.17■□□□□ 0.34
SNTB1-203ENST00000519177 DYRK3O43781 588 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 PFDN1O60925 122 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 S100A5P33763 92 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 PPICP45877 212 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 FOXK2Q01167 660 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 SNAP47Q5SQN1 464 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 NIPAL3Q6P499 406 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 PLBD1Q6P4A8 553 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 TMEM151BQ8IW70 566 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 ZNF440Q8IYI8 595 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 GPR135Q8IZ08 494 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 CADM2Q8N3J6 435 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 GATAD2BQ8WXI9 593 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 TRMT61AQ96FX7 289 aaKnown RBP17.17■□□□□ 0.34
SNTB1-203ENST00000519177 ELF4Q99607 663 aaPredicted RBP17.17■□□□□ 0.34
SNTB1-203ENST00000519177 ZNF649Q9BS31 505 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 IFT27Q9BW83 186 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 DHCR7Q9UBM7 475 aaKnown RBP17.17■□□□□ 0.34
SNTB1-203ENST00000519177 A0A075B6Q4 140 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 J3QRE1 110 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 CBFA2T3O75081 653 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 NGFRP08138 427 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 RORAP35398 523 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 ADH7P40394 386 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 GPR143P51810 404 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 PLK5Q496M5 336 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 ARMC4Q5T2S8 1044 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 YOD1Q5VVQ6 348 aaPredicted RBP17.17■□□□□ 0.34
SNTB1-203ENST00000519177 MEPCEQ7L2J0 689 aaKnown RBP17.17■□□□□ 0.34
SNTB1-203ENST00000519177 LSRQ86X29 649 aaPredicted RBP17.17■□□□□ 0.34
SNTB1-203ENST00000519177 SLITRK4Q8IW52 837 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 TSLPQ969D9 159 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 SERTAD3Q9UJW9 196 aa17.17■□□□□ 0.34
SNTB1-203ENST00000519177 TRAV27A0A087WT01 109 aa17.16■□□□□ 0.34
SNTB1-203ENST00000519177 ANKRD33BA6NCL7 494 aa17.16■□□□□ 0.34
SNTB1-203ENST00000519177 FAM183AA6NL82 134 aa17.16■□□□□ 0.34
SNTB1-203ENST00000519177 IL33O95760 270 aa17.16■□□□□ 0.34
SNTB1-203ENST00000519177 OCM2P0CE71 109 aa17.16■□□□□ 0.34
SNTB1-203ENST00000519177 OCMP0CE72 109 aaPredicted RBP17.16■□□□□ 0.34
SNTB1-203ENST00000519177 MYF5P13349 255 aa17.16■□□□□ 0.34
SNTB1-203ENST00000519177 FBLP22087 321 aaKnown RBP17.16■□□□□ 0.34
SNTB1-203ENST00000519177 ARRB1P49407 418 aaPredicted RBP17.16■□□□□ 0.34
SNTB1-203ENST00000519177 IFITM3Q01628 133 aa17.16■□□□□ 0.34
SNTB1-203ENST00000519177 ACSM1Q08AH1 577 aa17.16■□□□□ 0.34
SNTB1-203ENST00000519177 ATP1A4Q13733 1029 aa17.16■□□□□ 0.34
SNTB1-203ENST00000519177 MAMSTRQ6ZN01 415 aa17.16■□□□□ 0.34
SNTB1-203ENST00000519177 RTL4Q6ZR62 310 aa17.16■□□□□ 0.34
SNTB1-203ENST00000519177 Q7L0L9 218 aa17.16■□□□□ 0.34
SNTB1-203ENST00000519177 OAFQ86UD1 273 aa17.16■□□□□ 0.34
SNTB1-203ENST00000519177 LHFPL3Q86UP9 236 aa17.16■□□□□ 0.34
SNTB1-203ENST00000519177 ZNF321PQ8N8H1 164 aa17.16■□□□□ 0.34
SNTB1-203ENST00000519177 FAM71CQ8NEG0 241 aa17.16■□□□□ 0.34
SNTB1-203ENST00000519177 OR52N1Q8NH53 320 aa17.16■□□□□ 0.34
SNTB1-203ENST00000519177 DNAJA4Q8WW22 397 aaPredicted RBP17.16■□□□□ 0.34
SNTB1-203ENST00000519177 UFD1Q92890 307 aa17.16■□□□□ 0.34
SNTB1-203ENST00000519177 ABTB1Q969K4 478 aaPredicted RBP17.16■□□□□ 0.34
SNTB1-203ENST00000519177 MROQ9BYG7 248 aa17.16■□□□□ 0.34
SNTB1-203ENST00000519177 ZNF304Q9HCX3 659 aa17.16■□□□□ 0.34
SNTB1-203ENST00000519177 ERVK13-1Q9NX77 482 aa17.16■□□□□ 0.34
SNTB1-203ENST00000519177 TNFRSF10DQ9UBN6 386 aa17.16■□□□□ 0.34
SNTB1-203ENST00000519177 IGKV3-11P04433 115 aa17.15■□□□□ 0.34
SNTB1-203ENST00000519177 RPS19P39019 145 aaKnown RBP17.15■□□□□ 0.34
SNTB1-203ENST00000519177 ZNF45Q02386 682 aa17.15■□□□□ 0.34
SNTB1-203ENST00000519177 FHL1Q13642 323 aa17.15■□□□□ 0.34
SNTB1-203ENST00000519177 ELAVL1Q15717 326 aaKnown RBP17.15■□□□□ 0.34
SNTB1-203ENST00000519177 NDUFAF6Q330K2 333 aa17.15■□□□□ 0.34
SNTB1-203ENST00000519177 SLC35F1Q5T1Q4 408 aa17.15■□□□□ 0.34
SNTB1-203ENST00000519177 PRAMEF17Q5VTA0 474 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms