RNA–Protein interactions for RNA: ENST00000512878.1

RHOBTB3-213, Transcript of Rho related BTB domain containing 3, human

TSL 2

Gene RHOBTB3, Length 483 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHOBTB3-213	ENST00000512878	C22orf34	Q6ZV56	151 aa		11.45	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	ZNF614	Q8N883	585 aa		11.45	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	ZNF610	Q8N9Z0	462 aa		11.45	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	VPS37A	Q8NEZ2	397 aa		11.45	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	OR5W2	Q8NH69	310 aa		11.45	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	XAGE5	Q8WWM1	108 aa		11.45	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	NINJ1	Q92982	152 aa		11.45	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	GMPPA	Q96IJ6	420 aa	Predicted RBP	11.45	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	KLHL15	Q96M94	604 aa		11.45	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	SLC35A5	Q9BS91	424 aa		11.45	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	INPP5K	Q9BT40	448 aa		11.45	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	SRXN1	Q9BYN0	137 aa		11.45	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	COQ10B	Q9H8M1	238 aa		11.45	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	PLSCR4	Q9NRQ2	329 aa		11.45	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	SLC6A13	Q9NSD5	602 aa		11.45	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	PAQR5	Q9NXK6	330 aa	Predicted RBP	11.45	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	NKIRAS1	Q9NYS0	192 aa		11.45	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	CLEC4A	Q9UMR7	237 aa		11.45	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	TESMIN	Q9Y4I5	508 aa		11.45	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	CCDC154	A6NI56	674 aa		11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	SLCO1B7	G3V0H7	640 aa		11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	GTPBP1	O00178	669 aa	Known RBP	11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	GOSR1	O95249	250 aa		11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	NUDT14	O95848	222 aa		11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	ME2	P23368	584 aa		11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	UGT2B10	P36537	528 aa		11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	PGM1	P36871	562 aa		11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	FGFBP1	Q14512	234 aa		11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	ZNF239	Q16600	458 aa	Known RBP	11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	AGBL2	Q5U5Z8	902 aa		11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	HBM	Q6B0K9	141 aa		11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	C16orf62	Q7Z3J2	963 aa		11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	TOR1AIP2	Q8NFQ8	470 aa		11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	RFWD2	Q8NHY2	731 aa		11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	PIWIL2	Q8TC59	973 aa	Known RBP	11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	ZNF75CP	Q92670	426 aa	Predicted RBP	11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	OSTF1	Q92882	214 aa		11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	ROPN1L	Q96C74	230 aa		11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	MARK4	Q96L34	752 aa		11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	MRGPRX4	Q96LA9	322 aa		11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	WFIKKN1	Q96NZ8	548 aa		11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	OR52B2	Q96RD2	323 aa		11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	OR52E6	Q96RD3	313 aa		11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	LAT2	Q9GZY6	243 aa		11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	CXXC4	Q9H2H0	198 aa		11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	EXD2	Q9NVH0	621 aa		11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	MCTS1	Q9ULC4	181 aa	Known RBP	11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	WDR45	Q9Y484	360 aa		11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	USF3	Q68DE3	2245 aa		11.44	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	NIPBL	Q6KC79	2804 aa	eCLIP	11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	DEFB108A	A8MXU0	73 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	DIAPH2	O60879	1101 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	ADAM11	O75078	769 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	AGR2	O95994	175 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	CSTA	P01040	98 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	POU2F1	P14859	743 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	IDO1	P14902	403 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	CHI3L1	P36222	383 aa	Predicted RBP	11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	KHK	P50053	298 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	MVD	P53602	400 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	CARD18	P57730	90 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	CBFB	Q13951	182 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	QPRT	Q15274	297 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	MAPK11	Q15759	364 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	PDCD4	Q53EL6	469 aa	Known RBP	11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	COX20	Q5RI15	118 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	PPP4R4	Q6NUP7	873 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	PAMR1	Q6UXH9	720 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	ZNF550	Q7Z398	422 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	RNF130	Q86XS8	419 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	ZNF619	Q8N2I2	560 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	TMCO5A	Q8N6Q1	288 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	GLB1L3	Q8NCI6	653 aa	Predicted RBP	11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	OR6K3	Q8NGY3	331 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	RNF128	Q8TEB7	428 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	ZFP90	Q8TF47	636 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	OIT3	Q8WWZ8	545 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	ROBO4	Q8WZ75	1007 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	PANX1	Q96RD7	426 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	THUMPD3	Q9BV44	507 aa	Known RBP	11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	PRRG4	Q9BZD6	226 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	QRSL1	Q9H0R6	528 aa	Known RBP	11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	SLC38A1	Q9H2H9	487 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	POLE3	Q9NRF9	147 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	SDR39U1	Q9NRG7	319 aa	Predicted RBP	11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	KLHL28	Q9NXS3	571 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	ELOVL5	Q9NYP7	299 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	C6orf203	Q9P0P8	240 aa	Predicted RBP	11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	PROCR	Q9UNN8	238 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	ZAN	Q9Y493	2812 aa		11.43	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	NF1	P21359	2839 aa		11.42	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	CLDN24	A6NM45	220 aa		11.42	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	ATE1	O95260	518 aa		11.42	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	SYNGR4	O95473	234 aa		11.42	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	H6PD	O95479	791 aa		11.42	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	GSN	P06396	782 aa		11.42	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	CHRM4	P08173	479 aa		11.42	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	UBTFL6	P0CB48	400 aa	Predicted RBP	11.42	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	CD1E	P15812	388 aa		11.42	□□□□□ -0.58
RHOBTB3-213	ENST00000512878	AGTR1	P30556	359 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 1241.8 ms