RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 A0A0G2JMM0 328 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 A0A1W2PPB8 328 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 A0A1W2PRS3 328 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 CTAGE15A4D2H0 777 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 MBD3L4A6NDZ8 208 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 MBD3L3A6NE82 208 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 FRG2CA6NGY1 282 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 OR6C70A6NIJ9 312 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 FAM159BA6NKW6 160 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 TTC36A6NLP5 189 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 KIR3DP1A8MWS1 328 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 E7ESA3 106 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 C16orf97H3BN30 126 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 STX16-NPEPL1H3BU86 382 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 GTPBP1O00178 669 aaKnown RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 STX16O14662 325 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 RAD51CO43502 376 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 RGS14O43566 566 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 SCO2O43819 266 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 PCDH7O60245 1069 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 PRKNO60260 465 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 ICOSLGO75144 302 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 TRIM3O75382 744 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 EEDO75530 441 aaKnown RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 PRKRAO75569 313 aaKnown RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 PIAS1O75925 651 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 SCELO95171 688 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 SLU7O95391 586 aaKnown RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 ATP1B1P05026 303 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 CRHP06850 196 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 KRT16P08779 473 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 SNRPAP09012 282 aaKnown RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 ANXA4P09525 319 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 CTAGE8P0CG41 777 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 NEFHP12036 1026 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 HSD3B1P14060 373 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 CD22P20273 847 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 DRD5P21918 477 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 IL32P24001 234 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 SRD5A2P31213 254 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 CASP3P42574 277 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 PPICP45877 212 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 CCT5P48643 541 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 NCBP2P52298 156 aaKnown RBP eCLIP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 PNLIPRP2P54317 469 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 PRKAG1P54619 331 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 NR1H2P55055 460 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 DSCR4P56555 118 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 KRTAP10-9P60411 292 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 MRPS35P82673 323 aaKnown RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 TIAL1Q01085 375 aaKnown RBP eCLIP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 CRYZQ08257 329 aaKnown RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 C17orf67Q0P5P2 114 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 C2orf80Q0P641 193 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 FOXI1Q12951 378 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 CSTF3Q12996 717 aaKnown RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 E2F2Q14209 437 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 GANABQ14697 944 aaKnown RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 DAZAP2Q15038 168 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZKSCAN8Q15776 578 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZIK1Q3SY52 487 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 EIPR1Q53HC9 387 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 SFRP4Q6FHJ7 346 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 SLC48A1Q6P1K1 146 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 BHLHB9Q6PI77 547 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZNF793Q6ZN11 406 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 GPRIN3Q6ZVF9 776 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 PLEKHM3Q6ZWE6 761 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 COMMD6Q7Z4G1 85 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 CTAGE6Q86UF2 777 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 LCA5Q86VQ0 697 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 SLC44A2Q8IWA5 706 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 CTAGE4Q8IX94 777 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 IFT20Q8IY31 132 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 GCNT2Q8N0V5 402 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 RPRMLQ8N4K4 120 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 MARVELD2Q8N4S9 558 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZNF321PQ8N8H1 164 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZNF527Q8NB42 609 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 SIMC1Q8NDZ2 872 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 FAM83FQ8NEG4 500 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 GPR151Q8TDV0 419 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 ACTRT2Q8TDY3 377 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 TMBIM1Q969X1 311 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 NTNG2Q96CW9 530 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 PGM2Q96G03 612 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZC3HAV1LQ96H79 300 aaKnown RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 UBXN10Q96LJ8 280 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 FMO2Q99518 471 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 PRPF18Q99633 342 aaKnown RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 TEP1Q99973 2627 aaKnown RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 LRRC1Q9BTT6 524 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 PTDSS2Q9BVG9 487 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 ITPAQ9BY32 194 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 UGT2B28Q9BY64 529 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 MRPL1Q9BYD6 325 aaKnown RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 AMBRA1Q9C0C7 1298 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 CXorf36Q9H7Y0 433 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 CXorf21Q9HAI6 301 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 EHD3Q9NZN3 535 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms