RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	SHC1	P29353	583 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	RYK	P34925	604 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	PGM1	P36871	562 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	SLC6A8	P48029	635 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	KRTAP10-9	P60411	292 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	KCNJ10	P78508	379 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	TXNL4A	P83876	142 aa	Known RBP	12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	CTU2	Q2VPK5	515 aa	Known RBP	12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	TMEM176B	Q3YBM2	270 aa	Predicted RBP	12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	FBXL19-AS1	Q494R0	122 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	AGK	Q53H12	422 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	PDSS1	Q5T2R2	415 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	VWA1	Q6PCB0	445 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	BLOC1S3	Q6QNY0	202 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	LRRC74B	Q6ZQY2	392 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	ESPNL	Q6ZVH7	1005 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	ZZZ3	Q8IYH5	903 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	OSTF1	Q92882	214 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	SPDL1	Q96EA4	605 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	ADGRG7	Q96K78	797 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	MRGPRX4	Q96LA9	322 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	LURAP1	Q96LR2	239 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	KLHL15	Q96M94	604 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	SLC38A1	Q9H2H9	487 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	PIGM	Q9H3S5	423 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	SLC24A3	Q9HC58	644 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	JKAMP	Q9P055	326 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	KCNN3	Q9UGI6	736 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	FOXD3	Q9UJU5	478 aa	Predicted RBP	12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	PACSIN3	Q9UKS6	424 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	MCTS1	Q9ULC4	181 aa	Known RBP	12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	SLC35A3	Q9Y2D2	325 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	PCDHB14	Q9Y5E9	798 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	TEX15	Q9BXT5	2789 aa		12.7	□□□□□ -0.38
CCHCR1-222	ENST00000507459	UQCRHL	A0A096LP55	91 aa		12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459		A0A0G2JND7	137 aa		12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	ADAMDEC1	O15204	470 aa		12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	CRH	P06850	196 aa		12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	FCGR2A	P12318	317 aa		12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	PGC	P20142	388 aa		12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	ELK4	P28324	431 aa		12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	CPOX	P36551	454 aa		12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	KIR2DL2	P43627	348 aa	Predicted RBP	12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	MRPL19	P49406	292 aa	Known RBP	12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	MVD	P53602	400 aa		12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	CARD18	P57730	90 aa		12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	SESN3	P58005	492 aa		12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	DSTN	P60981	165 aa		12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	EEF1A1	P68104	462 aa	Known RBP	12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	SQLE	Q14534	574 aa		12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	EEF1A1P5	Q5VTE0	462 aa		12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	BTLA	Q7Z6A9	289 aa		12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	KIF18B	Q86Y91	864 aa		12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	ZNF563	Q8TA94	476 aa		12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	STARD4	Q96DR4	205 aa		12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	PAIP1	Q9H074	479 aa	Known RBP	12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	MTHFD2L	Q9H903	347 aa	Predicted RBP	12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	RNF122	Q9H9V4	155 aa		12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	MCCC2	Q9HCC0	563 aa		12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	PAQR5	Q9NXK6	330 aa	Predicted RBP	12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	CRIM1	Q9NZV1	1036 aa		12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	P2RX2	Q9UBL9	471 aa		12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	CLEC4A	Q9UMR7	237 aa		12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	FBN2	P35556	2912 aa		12.69	□□□□□ -0.38
CCHCR1-222	ENST00000507459	DCHS2	Q6V1P9	2916 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	MPDZ	O75970	2070 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459		A0A096LPI6	279 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	TUBAL3	A6NHL2	446 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	GJE1	A6NN92	205 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459		A8MXE2	369 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	CLIC1	O00299	241 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	PLG	P00747	810 aa	Predicted RBP	12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	BCHE	P06276	602 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	CD1E	P15812	388 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	IL7R	P16871	459 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	CAPN3	P20807	821 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	PEX19	P40855	299 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	MERTK	Q12866	999 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	SF3A3	Q12874	501 aa	Known RBP eCLIP	12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	MAPK11	Q15759	364 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	HSP90B2P	Q58FF3	399 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	PAGE3	Q5JUK9	113 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	AP1AR	Q63HQ0	302 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	TMEM200A	Q86VY9	491 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	ARFGAP2	Q8N6H7	521 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	FAM71C	Q8NEG0	241 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	LINC01560	Q8TB33	94 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	WDR60	Q8WVS4	1066 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	OIT3	Q8WWZ8	545 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	TMEM234	Q8WY98	164 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	ROBO4	Q8WZ75	1007 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	CNOT9	Q92600	299 aa	Known RBP	12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	OPN3	Q9H1Y3	402 aa	Predicted RBP	12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	GALNT8	Q9NY28	637 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	SLAMF8	Q9P0V8	285 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	CREBBP	Q92793	2442 aa		12.68	□□□□□ -0.38
CCHCR1-222	ENST00000507459	APC	P25054	2843 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459		A0A1W2PNR3	127 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	TMEM247	A6NEH6	219 aa		12.67	□□□□□ -0.38

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