RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 OTUB1Q96FW1 271 aaPredicted RBP15.28■□□□□ 0.04
HMGN1-209ENST00000463631 TNFRSF13CQ96RJ3 184 aa15.28■□□□□ 0.04
HMGN1-209ENST00000463631 SIRT3Q9NTG7 399 aaPredicted RBP15.28■□□□□ 0.04
HMGN1-209ENST00000463631 SH3BP4Q9P0V3 963 aa15.28■□□□□ 0.04
HMGN1-209ENST00000463631 OR5H1A6NKK0 313 aa15.27■□□□□ 0.04
HMGN1-209ENST00000463631 ZNF724A8MTY0 619 aa15.27■□□□□ 0.04
HMGN1-209ENST00000463631 NPIPB9F8W1W9 429 aa15.27■□□□□ 0.04
HMGN1-209ENST00000463631 H3BNH8 94 aa15.27■□□□□ 0.04
HMGN1-209ENST00000463631 SLC28A1O00337 649 aa15.27■□□□□ 0.04
HMGN1-209ENST00000463631 SMAD9O15198 467 aaKnown RBP15.27■□□□□ 0.04
HMGN1-209ENST00000463631 AKAP10O43572 662 aa15.27■□□□□ 0.04
HMGN1-209ENST00000463631 CYTIPO60759 359 aa15.27■□□□□ 0.04
HMGN1-209ENST00000463631 GLRA3O75311 464 aa15.27■□□□□ 0.04
HMGN1-209ENST00000463631 PROCP04070 461 aa15.27■□□□□ 0.04
HMGN1-209ENST00000463631 SLC25A16P16260 332 aa15.27■□□□□ 0.04
HMGN1-209ENST00000463631 GGT1P19440 569 aa15.27■□□□□ 0.04
HMGN1-209ENST00000463631 ATP6V1C1P21283 382 aa15.27■□□□□ 0.04
HMGN1-209ENST00000463631 SLC7A1P30825 629 aa15.27■□□□□ 0.04
HMGN1-209ENST00000463631 THBS2P35442 1172 aa15.27■□□□□ 0.04
HMGN1-209ENST00000463631 IRX1P78414 480 aaPredicted RBP15.27■□□□□ 0.04
HMGN1-209ENST00000463631 TOMM34Q15785 309 aaPredicted RBP15.27■□□□□ 0.04
HMGN1-209ENST00000463631 STK11Q15831 433 aa15.27■□□□□ 0.04
HMGN1-209ENST00000463631 ARL13AQ5H913 290 aaPredicted RBP15.27■□□□□ 0.04
HMGN1-209ENST00000463631 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.27■□□□□ 0.04
HMGN1-209ENST00000463631 CLEC2AQ6UVW9 174 aa15.27■□□□□ 0.04
HMGN1-209ENST00000463631 Q6ZSR9 355 aa15.27■□□□□ 0.04
HMGN1-209ENST00000463631 TRMT10CQ7L0Y3 403 aaKnown RBP15.27■□□□□ 0.04
HMGN1-209ENST00000463631 C17orf53Q8N3J3 647 aaPredicted RBP15.27■□□□□ 0.04
HMGN1-209ENST00000463631 CDS1Q92903 461 aa15.27■□□□□ 0.04
HMGN1-209ENST00000463631 TSSK3Q96PN8 268 aa15.27■□□□□ 0.04
HMGN1-209ENST00000463631 CACNG6Q9BXT2 260 aa15.27■□□□□ 0.04
HMGN1-209ENST00000463631 ZCCHC3Q9NUD5 404 aaKnown RBP15.27■□□□□ 0.04
HMGN1-209ENST00000463631 PSMC3IPQ9P2W1 217 aaPredicted RBP15.27■□□□□ 0.04
HMGN1-209ENST00000463631 LPAR3Q9UBY5 353 aa15.27■□□□□ 0.04
HMGN1-209ENST00000463631 PRSS50Q9UI38 385 aa15.27■□□□□ 0.04
HMGN1-209ENST00000463631 CARD8Q9Y2G2 431 aa15.27■□□□□ 0.04
HMGN1-209ENST00000463631 TMED5Q9Y3A6 229 aa15.27■□□□□ 0.04
HMGN1-209ENST00000463631 PTGDR2Q9Y5Y4 395 aa15.27■□□□□ 0.04
HMGN1-209ENST00000463631 IGHV3-15A0A0B4J1V0 119 aa15.26■□□□□ 0.03
HMGN1-209ENST00000463631 FAM234BA2RU67 622 aa15.26■□□□□ 0.03
HMGN1-209ENST00000463631 DDX5P17844 614 aaKnown RBP15.26■□□□□ 0.03
HMGN1-209ENST00000463631 IGHV1-2P23083 117 aa15.26■□□□□ 0.03
HMGN1-209ENST00000463631 EDNRAP25101 427 aa15.26■□□□□ 0.03
HMGN1-209ENST00000463631 TTKP33981 857 aa15.26■□□□□ 0.03
HMGN1-209ENST00000463631 ASMTP46597 345 aa15.26■□□□□ 0.03
HMGN1-209ENST00000463631 RASGEF1BQ0VAM2 473 aa15.26■□□□□ 0.03
HMGN1-209ENST00000463631 LASP1Q14847 261 aaKnown RBP15.26■□□□□ 0.03
HMGN1-209ENST00000463631 CFAP157Q5JU67 520 aa15.26■□□□□ 0.03
HMGN1-209ENST00000463631 CLEC6AQ6EIG7 209 aa15.26■□□□□ 0.03
HMGN1-209ENST00000463631 CDC73Q6P1J9 531 aa15.26■□□□□ 0.03
HMGN1-209ENST00000463631 C3orf33Q6P1S2 294 aa15.26■□□□□ 0.03
HMGN1-209ENST00000463631 TOR1AIP2Q8NFQ8 470 aa15.26■□□□□ 0.03
HMGN1-209ENST00000463631 OR2T11Q8NH01 316 aa15.26■□□□□ 0.03
HMGN1-209ENST00000463631 PSMA8Q8TAA3 256 aa15.26■□□□□ 0.03
HMGN1-209ENST00000463631 ANP32BQ92688 251 aaKnown RBP15.26■□□□□ 0.03
HMGN1-209ENST00000463631 DHRS9Q9BPW9 319 aa15.26■□□□□ 0.03
HMGN1-209ENST00000463631 CBLN4Q9NTU7 201 aa15.26■□□□□ 0.03
HMGN1-209ENST00000463631 MGAT4BQ9UQ53 548 aa15.26■□□□□ 0.03
HMGN1-209ENST00000463631 H7C417 338 aa15.25■□□□□ 0.03
HMGN1-209ENST00000463631 RIPK2O43353 540 aa15.25■□□□□ 0.03
HMGN1-209ENST00000463631 ATP12AP54707 1039 aa15.25■□□□□ 0.03
HMGN1-209ENST00000463631 CASP9P55211 416 aa15.25■□□□□ 0.03
HMGN1-209ENST00000463631 RPL38P63173 70 aaKnown RBP15.25■□□□□ 0.03
HMGN1-209ENST00000463631 RFTN2Q52LD8 501 aaPredicted RBP15.25■□□□□ 0.03
HMGN1-209ENST00000463631 DCST2Q5T1A1 773 aa15.25■□□□□ 0.03
HMGN1-209ENST00000463631 TMEM108Q6UXF1 575 aa15.25■□□□□ 0.03
HMGN1-209ENST00000463631 LRIG3Q6UXM1 1119 aa15.25■□□□□ 0.03
HMGN1-209ENST00000463631 R3HCC1LQ7Z5L2 792 aaKnown RBP15.25■□□□□ 0.03
HMGN1-209ENST00000463631 GALNT5Q7Z7M9 940 aa15.25■□□□□ 0.03
HMGN1-209ENST00000463631 ZNF433Q8N7K0 673 aaPredicted RBP15.25■□□□□ 0.03
HMGN1-209ENST00000463631 OR5W2Q8NH69 310 aa15.25■□□□□ 0.03
HMGN1-209ENST00000463631 CLHC1Q8NHS4 586 aa15.25■□□□□ 0.03
HMGN1-209ENST00000463631 ZNF75CPQ92670 426 aaPredicted RBP15.25■□□□□ 0.03
HMGN1-209ENST00000463631 ZNF524Q96C55 264 aa15.25■□□□□ 0.03
HMGN1-209ENST00000463631 ZNF300Q96RE9 604 aaPredicted RBP15.25■□□□□ 0.03
HMGN1-209ENST00000463631 ACTRT3Q9BYD9 372 aa15.25■□□□□ 0.03
HMGN1-209ENST00000463631 OXSMQ9NWU1 459 aa15.25■□□□□ 0.03
HMGN1-209ENST00000463631 BAIAP2L1Q9UHR4 511 aa15.25■□□□□ 0.03
HMGN1-209ENST00000463631 ATP6V1HQ9UI12 483 aa15.25■□□□□ 0.03
HMGN1-209ENST00000463631 DTNAQ9Y4J8 743 aa15.25■□□□□ 0.03
HMGN1-209ENST00000463631 MALRD1Q5VYJ5 2156 aa15.25■□□□□ 0.03
HMGN1-209ENST00000463631 IGKV3D-15A0A087WSY6 115 aa15.24■□□□□ 0.03
HMGN1-209ENST00000463631 A0A1W2PNR3 127 aa15.24■□□□□ 0.03
HMGN1-209ENST00000463631 ESPNB1AK53 854 aa15.24■□□□□ 0.03
HMGN1-209ENST00000463631 E7EQL1 145 aa15.24■□□□□ 0.03
HMGN1-209ENST00000463631 LSM1O15116 133 aaKnown RBP15.24■□□□□ 0.03
HMGN1-209ENST00000463631 EIF4E2O60573 245 aaKnown RBP15.24■□□□□ 0.03
HMGN1-209ENST00000463631 PLIN3O60664 434 aa15.24■□□□□ 0.03
HMGN1-209ENST00000463631 DNAJA2O60884 412 aa15.24■□□□□ 0.03
HMGN1-209ENST00000463631 H6PDO95479 791 aa15.24■□□□□ 0.03
HMGN1-209ENST00000463631 C8BP07358 591 aa15.24■□□□□ 0.03
HMGN1-209ENST00000463631 KRT16P08779 473 aa15.24■□□□□ 0.03
HMGN1-209ENST00000463631 PTAFRP25105 342 aa15.24■□□□□ 0.03
HMGN1-209ENST00000463631 QPRTQ15274 297 aa15.24■□□□□ 0.03
HMGN1-209ENST00000463631 KRTAP24-1Q3LI83 254 aa15.24■□□□□ 0.03
HMGN1-209ENST00000463631 CCDC153Q494R4 210 aa15.24■□□□□ 0.03
HMGN1-209ENST00000463631 ABLIM2Q6H8Q1 611 aa15.24■□□□□ 0.03
HMGN1-209ENST00000463631 ATP6V1C2Q8NEY4 427 aa15.24■□□□□ 0.03
HMGN1-209ENST00000463631 OR56A1Q8NGH5 318 aa15.24■□□□□ 0.03
HMGN1-209ENST00000463631 BEX2Q9BXY8 128 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms