RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	FOXF1	Q12946	379 aa		11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	CBFB	Q13951	182 aa		11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	GNA13	Q14344	377 aa		11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	DAZAP2	Q15038	168 aa	Predicted RBP	11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	MAPRE2	Q15555	327 aa		11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	GCNT6	Q5T4J0	391 aa		11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	METTL21C	Q5VZV1	264 aa		11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	CBLN3	Q6UW01	205 aa		11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	EIF3M	Q7L2H7	374 aa	Known RBP	11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	CPLX4	Q7Z7G2	160 aa		11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	GRAMD2A	Q8IUY3	354 aa		11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	C9orf106	Q8NAJ2	232 aa		11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	ZNF563	Q8TA94	476 aa		11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	WDR60	Q8WVS4	1066 aa		11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	RNF145	Q96MT1	663 aa		11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	TRNT1	Q96Q11	434 aa	Known RBP	11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	FOXC2	Q99958	501 aa		11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	ELAC2	Q9BQ52	826 aa	Known RBP	11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	TUBA1C	Q9BQE3	449 aa		11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	MED17	Q9NVC6	651 aa		11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	DNAJB12	Q9NXW2	375 aa	Known RBP	11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	CALML5	Q9NZT1	146 aa		11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	SLAMF8	Q9P0V8	285 aa		11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	CLCF1	Q9UBD9	225 aa		11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	STOML1	Q9UBI4	398 aa		11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	CAPN7	Q9Y6W3	813 aa		11.46	□□□□□ -0.57
FDPS-204	ENST00000461507	IGLV3-32	A0A0A0MS00	114 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507		A6NNC1	897 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	EIF1AY	O14602	144 aa	Known RBP	11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	ZNF708	P17019	499 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	PPIB	P23284	216 aa	Known RBP	11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	CHM	P24386	653 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	LHX2	P50458	406 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	ART1	P52961	327 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	SEC24C	P53992	1094 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	CLDN18	P56856	261 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	FADD	Q13158	208 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	RGN	Q15493	299 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	ZNF141	Q15928	474 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	MAPK14	Q16539	360 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	SGCB	Q16585	318 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	CYP51A1	Q16850	503 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	PLPPR5	Q32ZL2	321 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	PLXDC2	Q6UX71	529 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	LRRC74B	Q6ZQY2	392 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	SPATA21	Q7Z572	469 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	PEX5L	Q8IYB4	626 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	C10orf82	Q8WW14	230 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	NRGN	Q92686	78 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	WNT2B	Q93097	391 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	MAL2	Q969L2	176 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	ZBTB8A	Q96BR9	441 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	TMEM19	Q96HH6	336 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	TM9SF2	Q99805	663 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	THUMPD3	Q9BV44	507 aa	Known RBP	11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	SFXN3	Q9BWM7	321 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	POLDIP3	Q9BY77	421 aa	Known RBP	11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	CLEC4M	Q9H2X3	399 aa	Predicted RBP	11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	ZNF385D	Q9H6B1	395 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	MRGBP	Q9NV56	204 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	TMEM45A	Q9NWC5	275 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	THUMPD1	Q9NXG2	353 aa	Known RBP	11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	SLC25A37	Q9NYZ2	338 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	VAPA	Q9P0L0	249 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	ARMCX1	Q9P291	453 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	CORO2B	Q9UQ03	480 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	SLC35A3	Q9Y2D2	325 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	ZNF337	Q9Y3M9	751 aa		11.45	□□□□□ -0.58
FDPS-204	ENST00000461507	PRAMEF27	A3QJZ7	478 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	CLDN24	A6NM45	220 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	CLCA1	A8K7I4	914 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	NPIPB9	F8W1W9	429 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	EIF4E2	O60573	245 aa	Known RBP	11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	NUDT7	P0C024	238 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	TMIGD3	P0DMS9	266 aa	Predicted RBP	11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	ZNF17	P17021	662 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	SFTPD	P35247	375 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	EIF1AX	P47813	144 aa	Known RBP	11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	IST1	P53990	364 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	SUMO3	P55854	103 aa	Predicted RBP	11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	MTPN	P58546	118 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	B3GALT5-AS1	P59052	145 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	RPS3A	P61247	264 aa	Known RBP	11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	KLF10	Q13118	480 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	SNTB1	Q13884	538 aa	Known RBP	11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	CAPRIN1	Q14444	709 aa	Known RBP	11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	FGFBP1	Q14512	234 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	QPRT	Q15274	297 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	BCL2A1	Q16548	175 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	LRIF1	Q5T3J3	769 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	SNX32	Q86XE0	403 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	KIF18B	Q86Y91	864 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	OR5W2	Q8NH69	310 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	FBXO27	Q8NI29	283 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	NFKBID	Q8NI38	313 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	ZNF317	Q96PQ6	595 aa	Predicted RBP	11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	KLHDC3	Q9BQ90	382 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	GPATCH1	Q9BRR8	931 aa	Known RBP	11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	PINK1	Q9BXM7	581 aa		11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms