RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 PEX12O00623 359 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 SCDO00767 359 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 OR10H3O60404 316 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 MPZL2O60487 215 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 EIF4E2O60573 245 aaKnown RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 MITFO75030 526 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 CSO75390 466 aaKnown RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 NME6O75414 186 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 REM1O75628 298 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 PPM1BO75688 479 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZFAND5O76080 213 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 CLPTM1O96005 669 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 CLPSP04118 112 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 CD3EP07766 207 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 GNAO1P09471 354 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 JMJD7P0C870 316 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 IFNGR1P15260 489 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 HPGDP15428 266 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 FUT4P22083 530 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 ELAVL4P26378 380 aaKnown RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 IL12BP29460 328 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 GGT2P36268 569 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 RPL5P46777 297 aaKnown RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 CLK3P49761 638 aaKnown RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 GPR143P51810 404 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 GTF2A1P52655 376 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 CRISP1P54107 249 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 PNLIPRP2P54317 469 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 CDC42P60953 191 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 CXCR4P61073 352 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 ISL1P61371 349 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 COPZ1P61923 177 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 TUBA4AP68366 448 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 RPP38P78345 283 aaKnown RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 MYBPC1Q00872 1141 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 IL1RL1Q01638 556 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 PPP1R8Q12972 351 aaKnown RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 TARDBPQ13148 414 aaKnown RBP eCLIP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 PIN1Q13526 163 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 EFR3AQ14156 821 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 FGFBP1Q14512 234 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 TRIP6Q15654 476 aaKnown RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 NPTX1Q15818 432 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 EXT1Q16394 746 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 MAPK14Q16539 360 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 ISXQ2M1V0 245 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 KLHL26Q53HC5 615 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 ENTPD8Q5MY95 495 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 RBM48Q5RL73 367 aaKnown RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 PDZK1Q5T2W1 519 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 CCNJQ5T5M9 372 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 MRPL2Q5T653 305 aaKnown RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF691Q5VV52 312 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF770Q6IQ21 691 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 C1orf94Q6P1W5 598 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 PODNL1Q6PEZ8 512 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 ULK3Q6PHR2 472 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 TMEM205Q6UW68 189 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 NPSR1Q6W5P4 371 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF730Q6ZMV8 503 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF517Q6ZMY9 492 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 PLEKHM3Q6ZWE6 761 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 MBOAT2Q6ZWT7 520 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 RAB11FIP2Q7L804 512 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 CPEB2Q7Z5Q1 589 aaKnown RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 B3GNT8Q7Z7M8 397 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 GALNT5Q7Z7M9 940 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 GLRX5Q86SX6 157 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF227Q86WZ6 799 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 RBM45Q8IUH3 476 aaKnown RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 PRSS58Q8IYP2 241 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 CDK20Q8IZL9 346 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF786Q8N393 782 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 CLIP4Q8N3C7 705 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 SLC15A4Q8N697 577 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 LSMEM1Q8N8F7 131 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 AQP11Q8NBQ7 271 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 NFAM1Q8NET5 270 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 TSPAN14Q8NG11 270 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 OR4D11Q8NGI4 311 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 WDR36Q8NI36 951 aaKnown RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 NUBPLQ8TB37 319 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 PIGXQ8TBF5 258 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 SLC7A13Q8TCU3 470 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 GNPDA2Q8TDQ7 276 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 DOK4Q8TEW6 326 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 DNAJA4Q8WW22 397 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 TRUB1Q8WWH5 349 aaKnown RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 DIO2Q92813 273 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 ADIPOR1Q96A54 375 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 NACC2Q96BF6 587 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 SLC41A3Q96GZ6 507 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 MPP4Q96JB8 637 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 Q96MT0 163 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 GAL3ST4Q96RP7 486 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 CCNL2Q96S94 520 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 PITX2Q99697 317 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 MCHR1Q99705 422 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 BARD1Q99728 777 aaKnown RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 FUZQ9BT04 418 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms