RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 SYPL1Q16563 259 aa18.24■□□□□ 0.51
GTF3A-202ENST00000419181 SGCBQ16585 318 aa18.24■□□□□ 0.51
GTF3A-202ENST00000419181 GTDC1Q4AE62 458 aa18.24■□□□□ 0.51
GTF3A-202ENST00000419181 SLC25A53Q5H9E4 307 aa18.24■□□□□ 0.51
GTF3A-202ENST00000419181 FUNDC1Q8IVP5 155 aa18.24■□□□□ 0.51
GTF3A-202ENST00000419181 LILRA2Q8N149 483 aa18.24■□□□□ 0.51
GTF3A-202ENST00000419181 OR2V1Q8NHB1 315 aa18.24■□□□□ 0.51
GTF3A-202ENST00000419181 STON2Q8WXE9 905 aa18.24■□□□□ 0.51
GTF3A-202ENST00000419181 GTF2H4Q92759 462 aa18.24■□□□□ 0.51
GTF3A-202ENST00000419181 MRGPRX4Q96LA9 322 aa18.24■□□□□ 0.51
GTF3A-202ENST00000419181 ZNF559Q9BR84 538 aa18.24■□□□□ 0.51
GTF3A-202ENST00000419181 SLC38A1Q9H2H9 487 aa18.24■□□□□ 0.51
GTF3A-202ENST00000419181 ZNF446Q9NWS9 450 aa18.24■□□□□ 0.51
GTF3A-202ENST00000419181 PAQR5Q9NXK6 330 aaPredicted RBP18.24■□□□□ 0.51
GTF3A-202ENST00000419181 SLC35A3Q9Y2D2 325 aa18.24■□□□□ 0.51
GTF3A-202ENST00000419181 TNFSF11O14788 317 aa18.23■□□□□ 0.51
GTF3A-202ENST00000419181 BCAS1O75363 584 aaPredicted RBP18.23■□□□□ 0.51
GTF3A-202ENST00000419181 ANP32DO95626 131 aa18.23■□□□□ 0.51
GTF3A-202ENST00000419181 CHRM4P08173 479 aa18.23■□□□□ 0.51
GTF3A-202ENST00000419181 UBTFL6P0CB48 400 aaPredicted RBP18.23■□□□□ 0.51
GTF3A-202ENST00000419181 SHC1P29353 583 aa18.23■□□□□ 0.51
GTF3A-202ENST00000419181 KIR2DL2P43627 348 aaPredicted RBP18.23■□□□□ 0.51
GTF3A-202ENST00000419181 KIR2DL3P43628 341 aa18.23■□□□□ 0.51
GTF3A-202ENST00000419181 SORDQ00796 357 aa18.23■□□□□ 0.51
GTF3A-202ENST00000419181 QPRTQ15274 297 aa18.23■□□□□ 0.51
GTF3A-202ENST00000419181 GUSBP1Q15486 140 aa18.23■□□□□ 0.51
GTF3A-202ENST00000419181 C6orf10Q5SRN2 563 aa18.23■□□□□ 0.51
GTF3A-202ENST00000419181 LRRC74BQ6ZQY2 392 aa18.23■□□□□ 0.51
GTF3A-202ENST00000419181 LUZP2Q86TE4 346 aa18.23■□□□□ 0.51
GTF3A-202ENST00000419181 STARD4Q96DR4 205 aa18.23■□□□□ 0.51
GTF3A-202ENST00000419181 KLHL15Q96M94 604 aa18.23■□□□□ 0.51
GTF3A-202ENST00000419181 THUMPD3Q9BV44 507 aaKnown RBP18.23■□□□□ 0.51
GTF3A-202ENST00000419181 QRSL1Q9H0R6 528 aaKnown RBP18.23■□□□□ 0.51
GTF3A-202ENST00000419181 TPT1P8Q9HAU6 139 aa18.23■□□□□ 0.51
GTF3A-202ENST00000419181 AGAP5A6NIR3 686 aa18.22■□□□□ 0.51
GTF3A-202ENST00000419181 A8MXE2 369 aa18.22■□□□□ 0.51
GTF3A-202ENST00000419181 CXCL13O43927 109 aa18.22■□□□□ 0.51
GTF3A-202ENST00000419181 CYP7B1O75881 506 aa18.22■□□□□ 0.51
GTF3A-202ENST00000419181 HOXB9P17482 250 aaPredicted RBP18.22■□□□□ 0.51
GTF3A-202ENST00000419181 SLC6A8P48029 635 aa18.22■□□□□ 0.51
GTF3A-202ENST00000419181 IRX1P78414 480 aaPredicted RBP18.22■□□□□ 0.51
GTF3A-202ENST00000419181 PLAURQ03405 335 aa18.22■□□□□ 0.51
GTF3A-202ENST00000419181 MAPK11Q15759 364 aa18.22■□□□□ 0.51
GTF3A-202ENST00000419181 HBMQ6B0K9 141 aa18.22■□□□□ 0.51
GTF3A-202ENST00000419181 VWA1Q6PCB0 445 aa18.22■□□□□ 0.51
GTF3A-202ENST00000419181 SLC2A7Q6PXP3 512 aa18.22■□□□□ 0.51
GTF3A-202ENST00000419181 BLOC1S3Q6QNY0 202 aa18.22■□□□□ 0.51
GTF3A-202ENST00000419181 HMGN2P46Q86SG4 172 aa18.22■□□□□ 0.51
GTF3A-202ENST00000419181 KIF18BQ86Y91 864 aa18.22■□□□□ 0.51
GTF3A-202ENST00000419181 CNEP1R1Q8N9A8 125 aa18.22■□□□□ 0.51
GTF3A-202ENST00000419181 AURKBQ96GD4 344 aaPredicted RBP18.22■□□□□ 0.51
GTF3A-202ENST00000419181 RBM24Q9BX46 236 aaKnown RBP18.22■□□□□ 0.51
GTF3A-202ENST00000419181 PAIP1Q9H074 479 aaKnown RBP18.22■□□□□ 0.51
GTF3A-202ENST00000419181 TMEM45AQ9NWC5 275 aa18.22■□□□□ 0.51
GTF3A-202ENST00000419181 GALNT8Q9NY28 637 aa18.22■□□□□ 0.51
GTF3A-202ENST00000419181 CRIM1Q9NZV1 1036 aa18.22■□□□□ 0.51
GTF3A-202ENST00000419181 MCTS1Q9ULC4 181 aaKnown RBP18.22■□□□□ 0.51
GTF3A-202ENST00000419181 ANKRD17O75179 2603 aaKnown RBP18.22■□□□□ 0.51
GTF3A-202ENST00000419181 MPDZO75970 2070 aa18.21■□□□□ 0.51
GTF3A-202ENST00000419181 CLDN24A6NM45 220 aa18.21■□□□□ 0.51
GTF3A-202ENST00000419181 MSTNO14793 375 aa18.21■□□□□ 0.51
GTF3A-202ENST00000419181 EDF1O60869 148 aaKnown RBP18.21■□□□□ 0.51
GTF3A-202ENST00000419181 NR2F1P10589 423 aa18.21■□□□□ 0.51
GTF3A-202ENST00000419181 ETFAP13804 333 aa18.21■□□□□ 0.51
GTF3A-202ENST00000419181 RPS4Y1P22090 263 aaKnown RBP18.21■□□□□ 0.51
GTF3A-202ENST00000419181 SFTPDP35247 375 aa18.21■□□□□ 0.51
GTF3A-202ENST00000419181 ATP4BP51164 291 aa18.21■□□□□ 0.51
GTF3A-202ENST00000419181 KCNJ10P78508 379 aa18.21■□□□□ 0.51
GTF3A-202ENST00000419181 SELENBP1Q13228 472 aa18.21■□□□□ 0.51
GTF3A-202ENST00000419181 ZZZ3Q8IYH5 903 aa18.21■□□□□ 0.51
GTF3A-202ENST00000419181 ST8SIA1Q92185 356 aa18.21■□□□□ 0.51
GTF3A-202ENST00000419181 PMM1Q92871 262 aa18.21■□□□□ 0.51
GTF3A-202ENST00000419181 SLC52A3Q9NQ40 469 aa18.21■□□□□ 0.51
GTF3A-202ENST00000419181 EXOSC3Q9NQT5 275 aaKnown RBP18.21■□□□□ 0.51
GTF3A-202ENST00000419181 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.21■□□□□ 0.51
GTF3A-202ENST00000419181 CCDC167Q9P0B6 97 aa18.21■□□□□ 0.51
GTF3A-202ENST00000419181 PCDHB14Q9Y5E9 798 aa18.21■□□□□ 0.51
GTF3A-202ENST00000419181 SPG11Q96JI7 2443 aa18.21■□□□□ 0.51
GTF3A-202ENST00000419181 GJE1A6NN92 205 aa18.2■□□□□ 0.5
GTF3A-202ENST00000419181 CGAP01215 116 aa18.2■□□□□ 0.5
GTF3A-202ENST00000419181 NID1P14543 1247 aa18.2■□□□□ 0.5
GTF3A-202ENST00000419181 PGCP20142 388 aa18.2■□□□□ 0.5
GTF3A-202ENST00000419181 CAPN3P20807 821 aa18.2■□□□□ 0.5
GTF3A-202ENST00000419181 CRATP43155 626 aa18.2■□□□□ 0.5
GTF3A-202ENST00000419181 CPA2P48052 419 aa18.2■□□□□ 0.5
GTF3A-202ENST00000419181 SIRPAP78324 504 aa18.2■□□□□ 0.5
GTF3A-202ENST00000419181 PDSS1Q5T2R2 415 aa18.2■□□□□ 0.5
GTF3A-202ENST00000419181 PPP4R4Q6NUP7 873 aa18.2■□□□□ 0.5
GTF3A-202ENST00000419181 BTLAQ7Z6A9 289 aa18.2■□□□□ 0.5
GTF3A-202ENST00000419181 CMIPQ8IY22 773 aa18.2■□□□□ 0.5
GTF3A-202ENST00000419181 FAM222BQ8WU58 562 aa18.2■□□□□ 0.5
GTF3A-202ENST00000419181 OSTF1Q92882 214 aa18.2■□□□□ 0.5
GTF3A-202ENST00000419181 SPDL1Q96EA4 605 aa18.2■□□□□ 0.5
GTF3A-202ENST00000419181 THOC1Q96FV9 657 aaKnown RBP18.2■□□□□ 0.5
GTF3A-202ENST00000419181 PRRG4Q9BZD6 226 aa18.2■□□□□ 0.5
GTF3A-202ENST00000419181 MTHFD2LQ9H903 347 aaPredicted RBP18.2■□□□□ 0.5
GTF3A-202ENST00000419181 P2RX2Q9UBL9 471 aa18.2■□□□□ 0.5
GTF3A-202ENST00000419181 DSPPQ9NZW4 1301 aa18.2■□□□□ 0.5
GTF3A-202ENST00000419181 CCDC168Q8NDH2 2452 aa18.2■□□□□ 0.5
GTF3A-202ENST00000419181 A0A096LPI6 279 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms