RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 CRISP3P54108 245 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 TPD52P55327 224 aaPredicted RBP7.55□□□□□ -1.2
BRCC3-205ENST00000399026 PER3P56645 1201 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 CLDN18P56856 261 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 NUP107P57740 925 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 TXNL4AP83876 142 aaKnown RBP7.55□□□□□ -1.2
BRCC3-205ENST00000399026 CDSNQ15517 529 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 MAPRE2Q15555 327 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 MMEL1Q495T6 779 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 ACSF3Q4G176 576 aaPredicted RBP7.55□□□□□ -1.2
BRCC3-205ENST00000399026 NHSL2Q5HYW2 709 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 VASNQ6EMK4 673 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 RPTNQ6XPR3 784 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 ZNF836Q6ZNA1 936 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 MTERF4Q7Z6M4 381 aaKnown RBP7.55□□□□□ -1.2
BRCC3-205ENST00000399026 CPLX4Q7Z7G2 160 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 MTDHQ86UE4 582 aaKnown RBP7.55□□□□□ -1.2
BRCC3-205ENST00000399026 VRK2Q86Y07 508 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 DPP10Q8N608 796 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 POC1BQ8TC44 478 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 SLC38A5Q8WUX1 472 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 ITLN2Q8WWU7 325 aaPredicted RBP7.55□□□□□ -1.2
BRCC3-205ENST00000399026 ZNF524Q96C55 264 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 RCN3Q96D15 328 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 DTNBP1Q96EV8 351 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 WDYHV1Q96HA8 205 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 DMRTA2Q96SC8 542 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 CGREF1Q99674 301 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 TREX2Q9BQ50 279 aaPredicted RBP7.55□□□□□ -1.2
BRCC3-205ENST00000399026 PRDM14Q9GZV8 571 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 A4GALTQ9NPC4 353 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 POLE3Q9NRF9 147 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 ICAM5Q9UMF0 924 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 LIPT1Q9Y234 373 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 ZNF443Q9Y2A4 671 aaPredicted RBP7.55□□□□□ -1.2
BRCC3-205ENST00000399026 PHF3Q92576 2039 aaKnown RBP7.55□□□□□ -1.2
BRCC3-205ENST00000399026 SPTAN1Q13813 2472 aaKnown RBP7.55□□□□□ -1.2
BRCC3-205ENST00000399026 DIDO1Q9BTC0 2240 aaKnown RBP7.55□□□□□ -1.2
BRCC3-205ENST00000399026 DSPPQ9NZW4 1301 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 HEATR5AQ86XA9 2040 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 USP9YO00507 2555 aaPredicted RBP7.54□□□□□ -1.2
BRCC3-205ENST00000399026 TMEM247A6NEH6 219 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 AGAP5A6NIR3 686 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 FAM90A27PA6NNH2 459 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 BBIP1A8MTZ0 92 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 C5orf58C9J3I9 102 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 E9PLN8 166 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 AP3D1O14617 1153 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 ADAM11O75078 769 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 WDR1O75083 606 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 CLDN1O95832 211 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 ACTL6AO96019 429 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 TFPTP0C1Z6 253 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 PEPDP12955 493 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 ZNF708P17019 499 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 ZNF17P17021 662 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 IL11P20809 199 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 PPIBP23284 216 aaKnown RBP7.54□□□□□ -1.2
BRCC3-205ENST00000399026 RYKP34925 604 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 PGM1P36871 562 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 P2RX1P51575 399 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 SUMO3P55854 103 aaPredicted RBP7.54□□□□□ -1.2
BRCC3-205ENST00000399026 CLDN20P56880 219 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 CBFBQ13951 182 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 SCARB2Q14108 478 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 QPRTQ15274 297 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 CYP51A1Q16850 503 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 RUNDC3AQ59EK9 446 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 RABL3Q5HYI8 236 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 MRPL2Q5T653 305 aaKnown RBP7.54□□□□□ -1.2
BRCC3-205ENST00000399026 HIST2H2BCQ6DN03 193 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 PPP4R4Q6NUP7 873 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 AAGABQ6PD74 315 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 POMZP3Q6PJE2 187 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 ENPP6Q6UWR7 440 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 B3GNT6Q6ZMB0 384 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 EIF3MQ7L2H7 374 aaKnown RBP7.54□□□□□ -1.2
BRCC3-205ENST00000399026 CCDC71Q8IV32 467 aaPredicted RBP7.54□□□□□ -1.2
BRCC3-205ENST00000399026 FAM71CQ8NEG0 241 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 OR52P1PQ8NH57 321 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 FBXO27Q8NI29 283 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 BBS10Q8TAM1 723 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 CNOT9Q92600 299 aaKnown RBP7.54□□□□□ -1.2
BRCC3-205ENST00000399026 SDCCAG3Q96C92 435 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 ANKRD27Q96NW4 1050 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 TRIB1Q96RU8 372 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 VKORC1Q9BQB6 163 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 TUBA1CQ9BQE3 449 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 PIGQQ9BRB3 760 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 THUMPD3Q9BV44 507 aaKnown RBP7.54□□□□□ -1.2
BRCC3-205ENST00000399026 CCDC106Q9BWC9 280 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 PIF1Q9H611 641 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 CALML5Q9NZT1 146 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 USP22Q9UPT9 525 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 CORO2BQ9UQ03 480 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 ZNF337Q9Y3M9 751 aa7.54□□□□□ -1.2
BRCC3-205ENST00000399026 ASH1LQ9NR48 2969 aaKnown RBP7.53□□□□□ -1.2
BRCC3-205ENST00000399026 A0A087WZY1 265 aa7.53□□□□□ -1.2
BRCC3-205ENST00000399026 CLCA1A8K7I4 914 aa7.53□□□□□ -1.2
BRCC3-205ENST00000399026 EVPLLA8MZ36 301 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms