RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 IGF2RP11717 2491 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 ALOX12BO75342 701 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 INMTO95050 263 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 HTR2AP28223 471 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 ROR2Q01974 943 aaKnown RBP13.9□□□□□ -0.18
SCAF11-204ENST00000395454 SRSF6Q13247 344 aaKnown RBP13.9□□□□□ -0.18
SCAF11-204ENST00000395454 IRF3Q14653 427 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.9□□□□□ -0.18
SCAF11-204ENST00000395454 TMEM236Q5W0B7 351 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 FIGNL1Q6PIW4 674 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 SLC16A12Q6ZSM3 486 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 RASSF6Q6ZTQ3 369 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 LANCL3Q6ZV70 420 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 MBOAT2Q6ZWT7 520 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 AHSA2Q719I0 299 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 ZSCAN1Q8NBB4 408 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 PLPP5Q8NEB5 264 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 OR8J1Q8NGP2 316 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 C16orf52Q8NHV5 167 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 RORBQ92753 470 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 GGHQ92820 318 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 MYDGFQ969H8 173 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 PRSS27Q9BQR3 290 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 POLDIP3Q9BY77 421 aaKnown RBP13.9□□□□□ -0.18
SCAF11-204ENST00000395454 TRAPPC13A5PLN9 417 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 KLK10O43240 276 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 SOX14O95416 240 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 IGKV1D-16P01601 117 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 IFNA16P05015 189 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 PEX19P40855 299 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 ZNF267Q14586 743 aaPredicted RBP13.9□□□□□ -0.18
SCAF11-204ENST00000395454 OCLNQ16625 522 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 KIF18BQ86Y91 864 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 ANKRD13BQ86YJ7 626 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 CMIPQ8IY22 773 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 CLDN22Q8N7P3 220 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 PIGXQ8TBF5 258 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 PTPMT1Q8WUK0 201 aaPredicted RBP13.9□□□□□ -0.18
SCAF11-204ENST00000395454 MPP4Q96JB8 637 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 MESP1Q9BRJ9 268 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 CCDC90BQ9GZT6 254 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 NAA50Q9GZZ1 169 aaKnown RBP13.9□□□□□ -0.18
SCAF11-204ENST00000395454 OR10A5Q9H207 317 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 Q9N2J8 555 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 CTPS2Q9NRF8 586 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 PRODH2Q9UF12 536 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 ENPP5Q9UJA9 477 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 ERVK-19Q9WJR5 959 aa13.9□□□□□ -0.18
SCAF11-204ENST00000395454 URB1O60287 2271 aaKnown RBP13.89□□□□□ -0.19
SCAF11-204ENST00000395454 TCRBV16S1A1N1A0A5B0 115 aa13.89□□□□□ -0.19
SCAF11-204ENST00000395454 SYNDIG1LA6NDD5 238 aa13.89□□□□□ -0.19
SCAF11-204ENST00000395454 EFCAB10A6NFE3 127 aa13.89□□□□□ -0.19
SCAF11-204ENST00000395454 ATE1O95260 518 aa13.89□□□□□ -0.19
SCAF11-204ENST00000395454 IGKV3-11P04433 115 aa13.89□□□□□ -0.19
SCAF11-204ENST00000395454 IGFBP1P08833 259 aaPredicted RBP13.89□□□□□ -0.19
SCAF11-204ENST00000395454 PRG2P13727 222 aa13.89□□□□□ -0.19
SCAF11-204ENST00000395454 OTX2P32243 289 aa13.89□□□□□ -0.19
SCAF11-204ENST00000395454 GIPRP48546 466 aa13.89□□□□□ -0.19
SCAF11-204ENST00000395454 PSMD4P55036 377 aaKnown RBP13.89□□□□□ -0.19
SCAF11-204ENST00000395454 HOXC5Q00444 222 aa13.89□□□□□ -0.19
SCAF11-204ENST00000395454 FLYWCH1Q4VC44 716 aa13.89□□□□□ -0.19
SCAF11-204ENST00000395454 ZNF613Q6PF04 617 aa13.89□□□□□ -0.19
SCAF11-204ENST00000395454 ZNF730Q6ZMV8 503 aa13.89□□□□□ -0.19
SCAF11-204ENST00000395454 PTCHD4Q6ZW05 846 aa13.89□□□□□ -0.19
SCAF11-204ENST00000395454 NKAIN4Q8IVV8 208 aa13.89□□□□□ -0.19
SCAF11-204ENST00000395454 RNF113BQ8IZP6 322 aaKnown RBP13.89□□□□□ -0.19
SCAF11-204ENST00000395454 FAM26EQ8N5C1 309 aa13.89□□□□□ -0.19
SCAF11-204ENST00000395454 SNIP1Q8TAD8 396 aaKnown RBP13.89□□□□□ -0.19
SCAF11-204ENST00000395454 C8orf44Q96CB5 159 aa13.89□□□□□ -0.19
SCAF11-204ENST00000395454 G6PC3Q9BUM1 346 aa13.89□□□□□ -0.19
SCAF11-204ENST00000395454 CDCA4Q9BXL8 241 aa13.89□□□□□ -0.19
SCAF11-204ENST00000395454 FAM117AQ9C073 453 aa13.89□□□□□ -0.19
SCAF11-204ENST00000395454 PNO1Q9NRX1 252 aaKnown RBP13.89□□□□□ -0.19
SCAF11-204ENST00000395454 CLN6Q9NWW5 311 aa13.89□□□□□ -0.19
SCAF11-204ENST00000395454 DKK4Q9UBT3 224 aa13.89□□□□□ -0.19
SCAF11-204ENST00000395454 NTNG1Q9Y2I2 539 aa13.89□□□□□ -0.19
SCAF11-204ENST00000395454 H3BN98 237 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 GABARAPO95166 117 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 IL10RAQ13651 578 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 SSPNQ14714 243 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 YIPF6Q96EC8 236 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 Q96MT0 163 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 FUNDC2Q9BWH2 189 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 ZNF223Q9UK11 482 aaPredicted RBP13.88□□□□□ -0.19
SCAF11-204ENST00000395454 IGHV3-20A0A0C4DH32 117 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 ENO4A6NNW6 628 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 A8MUA0 341 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 C1QTNF9BB2RNN3 333 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 C17orf105B2RV13 164 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 M0R129 80 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 BCAS1O75363 584 aaPredicted RBP13.88□□□□□ -0.19
SCAF11-204ENST00000395454 CYC1P08574 325 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 C1QTNF9P0C862 333 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 POU1F1P28069 291 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 MAP2K4P45985 399 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 SLC37A1P57057 533 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 FGFBP1Q14512 234 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 CASP12Q6UXS9 341 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 PRICKLE2Q7Z3G6 844 aa13.88□□□□□ -0.19
SCAF11-204ENST00000395454 ANKRD37Q7Z713 158 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms