RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 ZNF285Q96NJ3 590 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 DPH7Q9BTV6 452 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 ERVK-19Q9WJR5 959 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 A0A087WUU8 490 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 hCG_1807616A0A1W2PRN6 198 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 C11orf98E9PRG8 122 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 K7ESM1 405 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 FCMRO60667 390 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 POP4O95707 220 aaKnown RBP8.23□□□□□ -1.09
RTN4-206ENST00000394611 RPL3P39023 403 aaKnown RBP8.23□□□□□ -1.09
RTN4-206ENST00000394611 TEKQ02763 1124 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 ILKQ13418 452 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 OR7A5Q15622 319 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 SLC16A13Q7RTY0 426 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 KIAA0907Q7Z7F0 614 aaPredicted RBP8.23□□□□□ -1.09
RTN4-206ENST00000394611 SPAG16Q8N0X2 631 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 ZNF687Q8N1G0 1237 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 C9orf62Q8N4C0 152 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 OR52I2Q8NH67 350 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 EFCAB11Q9BUY7 163 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 C1QTNF7Q9BXJ2 289 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 GABARAPL3Q9BY60 117 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 SMIM3Q9BZL3 60 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 LMAN2LQ9H0V9 348 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 C20orf85Q9H1P6 137 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 HINT3Q9NQE9 182 aaKnown RBP8.23□□□□□ -1.09
RTN4-206ENST00000394611 SLC22A11Q9NSA0 550 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 OR1A2Q9Y585 309 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 GBF1Q92538 1859 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 ANTXRLA6NF34 631 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 GPR171O14626 319 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 SSX5O60225 188 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 WNT1P04628 370 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 GALTP07902 379 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 ICAM2P13598 275 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 GABRA5P31644 462 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 HTRA4P83105 476 aaPredicted RBP8.23□□□□□ -1.09
RTN4-206ENST00000394611 TRAM2Q15035 370 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 COL28A1Q2UY09 1125 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 CD300LGQ6UXG3 332 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 KCTD20Q7Z5Y7 419 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 FAM174AQ8TBP5 190 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 BCL7CQ8WUZ0 217 aaPredicted RBP8.23□□□□□ -1.09
RTN4-206ENST00000394611 RAD9AQ99638 391 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 PITX2Q99697 317 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 CCDC3Q9BQI4 270 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 DMRT3Q9NQL9 472 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 PRMT8Q9NR22 394 aaPredicted RBP8.23□□□□□ -1.09
RTN4-206ENST00000394611 INSL6Q9Y581 213 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 DCDC2BA2VCK2 349 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 PRAMEF25A6NGN4 478 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 M0QYG6 137 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 FFAR1O14842 300 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 KHNYNO15037 678 aaKnown RBP8.22□□□□□ -1.09
RTN4-206ENST00000394611 GMDSO60547 372 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 SLC19A2O60779 497 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 PPM1BO75688 479 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 UBXN7O94888 489 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 ACP2P11117 423 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 NDUFV2P19404 249 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 F8A1P23610 371 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 CERS1P27544 350 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 AGFG1P52594 562 aaKnown RBP8.22□□□□□ -1.09
RTN4-206ENST00000394611 GBX2P52951 348 aaPredicted RBP8.22□□□□□ -1.09
RTN4-206ENST00000394611 ZNF155Q12901 538 aaPredicted RBP8.22□□□□□ -1.09
RTN4-206ENST00000394611 LY6G5CQ5SRR4 150 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 MEDAGQ5VYS4 303 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 PGBD3Q8N328 593 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 RASGEF1AQ8N9B8 481 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 OR4E2Q8NGC2 313 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 OR8J2Q8NGG1 315 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 OR4D11Q8NGI4 311 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 OR10R2Q8NGX6 335 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 CD300LFQ8TDQ1 290 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 WDR89Q96FK6 387 aaPredicted RBP8.22□□□□□ -1.09
RTN4-206ENST00000394611 PTCHD1Q96NR3 888 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 GPA33Q99795 319 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 ATF6BQ99941 703 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 CDCA4Q9BXL8 241 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 ING1Q9UK53 422 aaPredicted RBP8.22□□□□□ -1.09
RTN4-206ENST00000394611 CCL27Q9Y4X3 112 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 KCNE3Q9Y6H6 103 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 MED19A0JLT2 244 aaPredicted RBP8.22□□□□□ -1.09
RTN4-206ENST00000394611 IDSB3KWA1 339 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 IGLV3-25P01717 112 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 CA3P07451 260 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 FURINP09958 794 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 CBSLP0DN79 551 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 ARAFP10398 606 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 UGT2B7P16662 529 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 NFYAP23511 347 aaPredicted RBP8.22□□□□□ -1.09
RTN4-206ENST00000394611 CBSP35520 551 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 RPL34P49207 117 aaKnown RBP8.22□□□□□ -1.09
RTN4-206ENST00000394611 CLDN20P56880 219 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 PRR5P85299 388 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 SP140Q13342 867 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 CRMP1Q14194 572 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 EIF2B1Q14232 305 aaKnown RBP8.22□□□□□ -1.09
RTN4-206ENST00000394611 RPE65Q16518 533 aa8.22□□□□□ -1.09
RTN4-206ENST00000394611 DUSP6Q16828 381 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms