RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 PRKXP51817 358 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 GBX1Q14549 363 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 UBE2NLQ5JXB2 153 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 MRPL2Q5T653 305 aaKnown RBP16.28■□□□□ 0.2
PTPRU-202ENST00000373779 C8orf82Q6P1X6 216 aaPredicted RBP16.28■□□□□ 0.2
PTPRU-202ENST00000373779 NOX3Q9HBY0 568 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 TMEM129A0AVI4 362 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 SOCS6O14544 535 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 FABP7O15540 132 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 PRKRAO75569 313 aaKnown RBP16.28■□□□□ 0.2
PTPRU-202ENST00000373779 ENDOUP21128 410 aaKnown RBP16.28■□□□□ 0.2
PTPRU-202ENST00000373779 SLC14A1Q13336 389 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 OR52N1Q8NH53 320 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 GPR148Q8TDV2 347 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 KLHL15Q96M94 604 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 LMF1Q96S06 567 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 HOXD1Q9GZZ0 328 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 ACTR10Q9NZ32 417 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 RCE1Q9Y256 329 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 SLC22A5O76082 557 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 IGFBP1P08833 259 aaPredicted RBP16.28■□□□□ 0.2
PTPRU-202ENST00000373779 FPR3P25089 353 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 SLC6A11P48066 632 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 ZNF41P51814 821 aaPredicted RBP16.28■□□□□ 0.2
PTPRU-202ENST00000373779 EXOSC7Q15024 291 aaKnown RBP16.28■□□□□ 0.2
PTPRU-202ENST00000373779 OLIG3Q7RTU3 272 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 OR56B4Q8NH76 319 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 PRRG4Q9BZD6 226 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 APOC1P02654 83 aa16.27■□□□□ 0.2
PTPRU-202ENST00000373779 NTSR1P30989 418 aa16.27■□□□□ 0.2
PTPRU-202ENST00000373779 TRIM23P36406 574 aa16.27■□□□□ 0.2
PTPRU-202ENST00000373779 ULK3Q6PHR2 472 aa16.27■□□□□ 0.2
PTPRU-202ENST00000373779 C3P1Q6ZMU1 363 aa16.27■□□□□ 0.2
PTPRU-202ENST00000373779 MSRB3Q8IXL7 192 aa16.27■□□□□ 0.2
PTPRU-202ENST00000373779 MFSD9Q8NBP5 474 aa16.27■□□□□ 0.2
PTPRU-202ENST00000373779 FAM46BQ96A09 425 aa16.27■□□□□ 0.2
PTPRU-202ENST00000373779 CXXC1Q9P0U4 656 aaPredicted RBP16.27■□□□□ 0.2
PTPRU-202ENST00000373779 SLC35A3Q9Y2D2 325 aa16.27■□□□□ 0.2
PTPRU-202ENST00000373779 NPC1O15118 1278 aa16.27■□□□□ 0.2
PTPRU-202ENST00000373779 PLGP00747 810 aaPredicted RBP16.27■□□□□ 0.2
PTPRU-202ENST00000373779 SNRPBP14678 240 aaKnown RBP16.27■□□□□ 0.2
PTPRU-202ENST00000373779 ERVK-25P63136 954 aa16.27■□□□□ 0.2
PTPRU-202ENST00000373779 C1orf61Q13536 156 aa16.27■□□□□ 0.2
PTPRU-202ENST00000373779 ASB6Q9NWX5 421 aa16.27■□□□□ 0.2
PTPRU-202ENST00000373779 TMEM221A6NGB7 291 aa16.27■□□□□ 0.2
PTPRU-202ENST00000373779 EGFP01133 1207 aa16.27■□□□□ 0.2
PTPRU-202ENST00000373779 OPRD1P41143 372 aa16.27■□□□□ 0.2
PTPRU-202ENST00000373779 DEFB110Q30KQ9 67 aa16.27■□□□□ 0.2
PTPRU-202ENST00000373779 MAMDC2Q7Z304 686 aaPredicted RBP16.27■□□□□ 0.2
PTPRU-202ENST00000373779 IQCF2Q8IXL9 164 aa16.27■□□□□ 0.2
PTPRU-202ENST00000373779 OPALINQ96PE5 141 aa16.27■□□□□ 0.2
PTPRU-202ENST00000373779 M0R036 132 aa16.27■□□□□ 0.19
PTPRU-202ENST00000373779 SPDEFO95238 335 aa16.27■□□□□ 0.19
PTPRU-202ENST00000373779 FAM26EQ8N5C1 309 aa16.27■□□□□ 0.19
PTPRU-202ENST00000373779 SLIRPQ9GZT3 109 aaKnown RBP16.27■□□□□ 0.19
PTPRU-202ENST00000373779 ANKRD19PQ9H560 264 aa16.27■□□□□ 0.19
PTPRU-202ENST00000373779 PNMTP11086 282 aa16.27■□□□□ 0.19
PTPRU-202ENST00000373779 PRKAR1BP31321 381 aa16.27■□□□□ 0.19
PTPRU-202ENST00000373779 TM4SF4P48230 202 aa16.27■□□□□ 0.19
PTPRU-202ENST00000373779 CLRN1P58418 232 aa16.27■□□□□ 0.19
PTPRU-202ENST00000373779 NKX3-2P78367 333 aa16.27■□□□□ 0.19
PTPRU-202ENST00000373779 RPL22L1Q6P5R6 122 aaKnown RBP16.27■□□□□ 0.19
PTPRU-202ENST00000373779 OR52R1Q8NGF1 315 aa16.27■□□□□ 0.19
PTPRU-202ENST00000373779 EVA1AQ9H8M9 152 aa16.27■□□□□ 0.19
PTPRU-202ENST00000373779 ANKRD34BA5PLL1 514 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 MTRF1O75570 445 aaKnown RBP16.26■□□□□ 0.19
PTPRU-202ENST00000373779 APBB3O95704 486 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 PLATP00750 562 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 CPEP16870 476 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 PTBP1P26599 531 aaKnown RBP eCLIP16.26■□□□□ 0.19
PTPRU-202ENST00000373779 PBX2P40425 430 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 FCN2Q15485 313 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 WDR45BQ5MNZ6 344 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 SLC6A19Q695T7 634 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 SLC16A12Q6ZSM3 486 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 MMP21Q8N119 569 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 GALNT11Q8NCW6 608 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 OR4K17Q8NGC6 315 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 ELP5Q8TE02 316 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 CSF3RQ99062 836 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 METTL7AQ9H8H3 244 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 WASH3PC4AMC7 463 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 PRKACBP22694 351 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 PRSS36Q5K4E3 855 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 C18orf63Q68DL7 685 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 PAQR6Q6TCH4 344 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 TMEM255BQ8WV15 326 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 C19orf43Q9BQ61 176 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 TRIP11Q15643 1979 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 TCRBV21S2A2A0A5A6 115 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 SMLR1H3BR10 107 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 TGM1P22735 817 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 RBMXP38159 391 aaKnown RBP16.26■□□□□ 0.19
PTPRU-202ENST00000373779 PLEKHN1Q494U1 663 aaPredicted RBP16.26■□□□□ 0.19
PTPRU-202ENST00000373779 ABHD4Q8TB40 342 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 TBC1D20Q96BZ9 403 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 C7orf34Q96L11 122 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 PRR14Q9BWN1 585 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 THSD7AQ9UPZ6 1657 aa16.26■□□□□ 0.19
PTPRU-202ENST00000373779 SYPP08247 313 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms