RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 PITX2Q99697 317 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 NDRG4Q9ULP0 352 aaKnown RBP16.09■□□□□ 0.17
GABRB3-202ENST00000311550 ITGB8P26012 769 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 EPHA2P29317 976 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 ZNF767PQ75MW2 155 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 TMEM255BQ8WV15 326 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 KLHL15Q96M94 604 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 HOXD1Q9GZZ0 328 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 SCN1AP35498 2009 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 HOXC12P31275 282 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 PRKXP51817 358 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 CSNK1G2P78368 415 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 P2RY14Q15391 338 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 CHRFAM7AQ494W8 412 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 ELP5Q8TE02 316 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 PGAM5Q96HS1 289 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 VSTM2BA6NLU5 285 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 H3BML4 177 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 M0R036 132 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 F3P13726 295 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 PRSS3P35030 304 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 C3orf38Q5JPI3 329 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 SLC25A44Q96H78 314 aaPredicted RBP16.09■□□□□ 0.17
GABRB3-202ENST00000311550 TMEM168Q9H0V1 697 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 ACER3Q9NUN7 267 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 CDC14CA4D256 554 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 NPIPA2E9PIF3 369 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 NPIPA3F8WFD2 350 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 MMP11P24347 488 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 AIMP2Q13155 320 aaKnown RBP16.09■□□□□ 0.17
GABRB3-202ENST00000311550 TCTE1Q5JU00 501 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 LRRC28Q86X40 367 aaPredicted RBP16.09■□□□□ 0.17
GABRB3-202ENST00000311550 ADAMTS18Q8TE60 1221 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 SHDQ96IW2 340 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 BTBD2Q9BX70 525 aa16.09■□□□□ 0.17
GABRB3-202ENST00000311550 PAHP00439 452 aa16.08■□□□□ 0.17
GABRB3-202ENST00000311550 UBL4AP11441 157 aa16.08■□□□□ 0.17
GABRB3-202ENST00000311550 COMMD7Q86VX2 200 aa16.08■□□□□ 0.17
GABRB3-202ENST00000311550 ZNF419Q96HQ0 510 aaPredicted RBP16.08■□□□□ 0.17
GABRB3-202ENST00000311550 COQ10AQ96MF6 247 aa16.08■□□□□ 0.17
GABRB3-202ENST00000311550 FBRSQ9HAH7 460 aa16.08■□□□□ 0.17
GABRB3-202ENST00000311550 SLC39A1Q9NY26 324 aa16.08■□□□□ 0.17
GABRB3-202ENST00000311550 SCML1Q9UN30 329 aa16.08■□□□□ 0.17
GABRB3-202ENST00000311550 BOLA1Q9Y3E2 137 aa16.08■□□□□ 0.17
GABRB3-202ENST00000311550 KIAA0100Q14667 2235 aaKnown RBP16.08■□□□□ 0.17
GABRB3-202ENST00000311550 PHYHO14832 338 aa16.08■□□□□ 0.16
GABRB3-202ENST00000311550 ETHE1O95571 254 aa16.08■□□□□ 0.16
GABRB3-202ENST00000311550 BCL6P41182 706 aa16.08■□□□□ 0.16
GABRB3-202ENST00000311550 LSSP48449 732 aa16.08■□□□□ 0.16
GABRB3-202ENST00000311550 PDX1P52945 283 aa16.08■□□□□ 0.16
GABRB3-202ENST00000311550 DEFB133Q30KQ1 61 aa16.08■□□□□ 0.16
GABRB3-202ENST00000311550 PRICKLE2Q7Z3G6 844 aa16.08■□□□□ 0.16
GABRB3-202ENST00000311550 FAM46BQ96A09 425 aa16.08■□□□□ 0.16
GABRB3-202ENST00000311550 PARPBPQ9NWS1 579 aa16.08■□□□□ 0.16
GABRB3-202ENST00000311550 DIMT1Q9UNQ2 313 aaKnown RBP16.08■□□□□ 0.16
GABRB3-202ENST00000311550 ASPDHA6ND91 283 aa16.08■□□□□ 0.16
GABRB3-202ENST00000311550 CENPBD1B2RD01 187 aa16.08■□□□□ 0.16
GABRB3-202ENST00000311550 ALDOBP05062 364 aa16.08■□□□□ 0.16
GABRB3-202ENST00000311550 ENDOUP21128 410 aaKnown RBP16.08■□□□□ 0.16
GABRB3-202ENST00000311550 PLGLB1Q02325 96 aa16.08■□□□□ 0.16
GABRB3-202ENST00000311550 EIF2B1Q14232 305 aaKnown RBP16.08■□□□□ 0.16
GABRB3-202ENST00000311550 SLX4IPQ5VYV7 408 aa16.08■□□□□ 0.16
GABRB3-202ENST00000311550 CADM3Q8N126 398 aa16.08■□□□□ 0.16
GABRB3-202ENST00000311550 STOML3Q8TAV4 291 aa16.08■□□□□ 0.16
GABRB3-202ENST00000311550 SLC7A13Q8TCU3 470 aa16.08■□□□□ 0.16
GABRB3-202ENST00000311550 GPR148Q8TDV2 347 aa16.08■□□□□ 0.16
GABRB3-202ENST00000311550 SNRPBP14678 240 aaKnown RBP16.08■□□□□ 0.16
GABRB3-202ENST00000311550 AMY2BP19961 511 aa16.08■□□□□ 0.16
GABRB3-202ENST00000311550 SSTR2P30874 369 aa16.08■□□□□ 0.16
GABRB3-202ENST00000311550 RPS19P39019 145 aaKnown RBP16.08■□□□□ 0.16
GABRB3-202ENST00000311550 TNFRSF17Q02223 184 aa16.08■□□□□ 0.16
GABRB3-202ENST00000311550 ZNF322Q6U7Q0 402 aaPredicted RBP16.08■□□□□ 0.16
GABRB3-202ENST00000311550 ZNF225Q9UK10 706 aa16.08■□□□□ 0.16
GABRB3-202ENST00000311550 CORINQ9Y5Q5 1042 aa16.08■□□□□ 0.16
GABRB3-202ENST00000311550 APOC1P02654 83 aa16.07■□□□□ 0.16
GABRB3-202ENST00000311550 F13BP05160 661 aa16.07■□□□□ 0.16
GABRB3-202ENST00000311550 PNMTP11086 282 aa16.07■□□□□ 0.16
GABRB3-202ENST00000311550 SHC1P29353 583 aa16.07■□□□□ 0.16
GABRB3-202ENST00000311550 GLP1RP43220 463 aa16.07■□□□□ 0.16
GABRB3-202ENST00000311550 RLN3Q8WXF3 142 aa16.07■□□□□ 0.16
GABRB3-202ENST00000311550 B3GAT2Q9NPZ5 323 aa16.07■□□□□ 0.16
GABRB3-202ENST00000311550 TAS2R8Q9NYW2 309 aa16.07■□□□□ 0.16
GABRB3-202ENST00000311550 VDAC3Q9Y277 283 aa16.07■□□□□ 0.16
GABRB3-202ENST00000311550 MAT1AQ00266 395 aaKnown RBP16.07■□□□□ 0.16
GABRB3-202ENST00000311550 SERTAD2Q14140 314 aa16.07■□□□□ 0.16
GABRB3-202ENST00000311550 ZNF565Q8N9K5 539 aa16.07■□□□□ 0.16
GABRB3-202ENST00000311550 TNFRSF13CQ96RJ3 184 aa16.07■□□□□ 0.16
GABRB3-202ENST00000311550 SLC6A17Q9H1V8 727 aa16.07■□□□□ 0.16
GABRB3-202ENST00000311550 TP53I11O14683 189 aa16.07■□□□□ 0.16
GABRB3-202ENST00000311550 RFPL3O75679 317 aa16.07■□□□□ 0.16
GABRB3-202ENST00000311550 LRRC26Q2I0M4 334 aa16.07■□□□□ 0.16
GABRB3-202ENST00000311550 TMEM184AQ6ZMB5 413 aa16.07■□□□□ 0.16
GABRB3-202ENST00000311550 SLC16A11Q8NCK7 471 aa16.07■□□□□ 0.16
GABRB3-202ENST00000311550 EPHX3Q9H6B9 360 aa16.07■□□□□ 0.16
GABRB3-202ENST00000311550 NTN4Q9HB63 628 aa16.07■□□□□ 0.16
GABRB3-202ENST00000311550 C2orf42Q9NWW7 574 aa16.07■□□□□ 0.16
GABRB3-202ENST00000311550 ACTBP60709 375 aa16.07■□□□□ 0.16
GABRB3-202ENST00000311550 HERV-K104P61576 105 aa16.07■□□□□ 0.16
GABRB3-202ENST00000311550 HNRNPKP61978 463 aaKnown RBP eCLIP16.07■□□□□ 0.16
GABRB3-202ENST00000311550 ACTG1P63261 375 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms